RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 ACBD5Q5T8D3 534 aaPredicted RBP5.69□□□□□ -1.5
USP8-216ENST00000561206 NT5DC4Q86YG4 428 aa5.69□□□□□ -1.5
USP8-216ENST00000561206 TRIM59Q8IWR1 403 aa5.69□□□□□ -1.5
USP8-216ENST00000561206 FAM169BQ8N8A8 192 aa5.69□□□□□ -1.5
USP8-216ENST00000561206 RCBTB1Q8NDN9 531 aa5.69□□□□□ -1.5
USP8-216ENST00000561206 MRGPRX3Q96LB0 322 aa5.69□□□□□ -1.5
USP8-216ENST00000561206 ARHGAP20Q9P2F6 1191 aa5.69□□□□□ -1.5
USP8-216ENST00000561206 GIT1Q9Y2X7 761 aa5.69□□□□□ -1.5
USP8-216ENST00000561206 IL18BPO95998 194 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 NAT2P11245 290 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 MFAP1P55081 439 aaKnown RBP5.68□□□□□ -1.5
USP8-216ENST00000561206 PAPD7Q5XG87 772 aaKnown RBP5.68□□□□□ -1.5
USP8-216ENST00000561206 SYCE2Q6PIF2 218 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 ADGRE4PQ86SQ3 457 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 CPLX3Q8WVH0 158 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 CFHR4Q92496 578 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 SEC16BQ96JE7 1060 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 SCYL1Q96KG9 808 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 PLA2G3Q9NZ20 509 aa5.68□□□□□ -1.5
USP8-216ENST00000561206 MASP2O00187 686 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 RHOBTB3O94955 611 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 GCP02774 474 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 SCG5P05408 212 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 HDLBPQ00341 1268 aaKnown RBP5.67□□□□□ -1.5
USP8-216ENST00000561206 KREMEN2Q8NCW0 462 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 CDIP1Q9H305 208 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 ADARB2Q9NS39 739 aaKnown RBP5.67□□□□□ -1.5
USP8-216ENST00000561206 GPRC5BQ9NZH0 403 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 STRIP2Q9ULQ0 834 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 NR2E1Q9Y466 385 aa5.67□□□□□ -1.5
USP8-216ENST00000561206 NOP56O00567 594 aaKnown RBP5.66□□□□□ -1.5
USP8-216ENST00000561206 NUDT3O95989 172 aa5.66□□□□□ -1.5
USP8-216ENST00000561206 MSX2P35548 267 aaPredicted RBP5.66□□□□□ -1.5
USP8-216ENST00000561206 NCAPHQ15003 741 aa5.66□□□□□ -1.5
USP8-216ENST00000561206 MICAL1Q8TDZ2 1067 aa5.66□□□□□ -1.5
USP8-216ENST00000561206 CLEC4DQ8WXI8 215 aa5.66□□□□□ -1.5
USP8-216ENST00000561206 APBA2Q99767 749 aa5.66□□□□□ -1.5
USP8-216ENST00000561206 SLC6A20Q9NP91 592 aa5.66□□□□□ -1.5
USP8-216ENST00000561206 MEFVO15553 781 aaPredicted RBP5.65□□□□□ -1.5
USP8-216ENST00000561206 ARHGAP6O43182 974 aa5.65□□□□□ -1.5
USP8-216ENST00000561206 ENO2P09104 434 aaPredicted RBP5.65□□□□□ -1.5
USP8-216ENST00000561206 FAHP16930 419 aa5.65□□□□□ -1.5
USP8-216ENST00000561206 ETV4P43268 484 aa5.65□□□□□ -1.5
USP8-216ENST00000561206 GLRBP48167 497 aa5.65□□□□□ -1.5
USP8-216ENST00000561206 THEMISQ8N1K5 641 aaPredicted RBP5.65□□□□□ -1.5
USP8-216ENST00000561206 BBC3Q96PG8 261 aaPredicted RBP5.65□□□□□ -1.5
USP8-216ENST00000561206 LGR4Q9BXB1 951 aa5.65□□□□□ -1.5
USP8-216ENST00000561206 NELFAQ9H3P2 528 aa5.65□□□□□ -1.5
USP8-216ENST00000561206 HECAQ9UBI9 543 aaPredicted RBP5.65□□□□□ -1.5
USP8-216ENST00000561206 ZBTB7CA1YPR0 619 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 ZNF839A8K0R7 811 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 KRIT1O00522 736 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 CYP27B1O15528 508 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 SLC25A3Q00325 362 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 PFKPQ01813 784 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 CD276Q5ZPR3 534 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 GPR150Q8NGU9 434 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 CLDND1Q9NY35 253 aa5.64□□□□□ -1.51
USP8-216ENST00000561206 PMS2P1A4D2B8 440 aa5.63□□□□□ -1.51
USP8-216ENST00000561206 PROB1E7EW31 1015 aa5.63□□□□□ -1.51
USP8-216ENST00000561206 LTBRP36941 435 aa5.63□□□□□ -1.51
USP8-216ENST00000561206 HHEXQ03014 270 aa5.63□□□□□ -1.51
USP8-216ENST00000561206 TBR1Q16650 682 aa5.63□□□□□ -1.51
USP8-216ENST00000561206 PAN2Q504Q3 1202 aaKnown RBP5.63□□□□□ -1.51
USP8-216ENST00000561206 SPTY2D1Q68D10 685 aaPredicted RBP5.63□□□□□ -1.51
USP8-216ENST00000561206 BTN2A2Q8WVV5 523 aa5.63□□□□□ -1.51
USP8-216ENST00000561206 ANAPC16Q96DE5 110 aa5.63□□□□□ -1.51
USP8-216ENST00000561206 HOXC12P31275 282 aa5.62□□□□□ -1.51
USP8-216ENST00000561206 FSTL1Q12841 308 aa5.62□□□□□ -1.51
USP8-216ENST00000561206 RRP1BQ14684 758 aaKnown RBP5.62□□□□□ -1.51
USP8-216ENST00000561206 NOLC1Q14978 699 aaKnown RBP eCLIP5.62□□□□□ -1.51
USP8-216ENST00000561206 ZNF227Q86WZ6 799 aa5.62□□□□□ -1.51
USP8-216ENST00000561206 PPP1R14AQ96A00 147 aa5.62□□□□□ -1.51
USP8-216ENST00000561206 TGIF2Q9GZN2 237 aa5.62□□□□□ -1.51
USP8-216ENST00000561206 C12orf65Q9H3J6 166 aaKnown RBP5.62□□□□□ -1.51
USP8-216ENST00000561206 PUF60Q9UHX1 559 aaKnown RBP5.62□□□□□ -1.51
USP8-216ENST00000561206 PCDHA2Q9Y5H9 948 aa5.62□□□□□ -1.51
USP8-216ENST00000561206 TBX1O43435 398 aa5.61□□□□□ -1.51
USP8-216ENST00000561206 GRIN1Q05586 938 aa5.61□□□□□ -1.51
USP8-216ENST00000561206 PCOLCEQ15113 449 aa5.61□□□□□ -1.51
USP8-216ENST00000561206 MBNL2Q5VZF2 373 aaKnown RBP5.61□□□□□ -1.51
USP8-216ENST00000561206 C6orf15Q6UXA7 325 aaPredicted RBP5.61□□□□□ -1.51
USP8-216ENST00000561206 MRGPREQ86SM8 312 aa5.61□□□□□ -1.51
USP8-216ENST00000561206 SGMS1Q86VZ5 419 aa5.61□□□□□ -1.51
USP8-216ENST00000561206 MRRFQ96E11 262 aaKnown RBP5.61□□□□□ -1.51
USP8-216ENST00000561206 ACBD3Q9H3P7 528 aa5.61□□□□□ -1.51
USP8-216ENST00000561206 PACSIN3Q9UKS6 424 aa5.61□□□□□ -1.51
USP8-216ENST00000561206 INPP5FQ9Y2H2 1132 aa5.61□□□□□ -1.51
USP8-216ENST00000561206 SLC27A2O14975 620 aa5.6□□□□□ -1.51
USP8-216ENST00000561206 ITGAVP06756 1048 aa5.6□□□□□ -1.51
USP8-216ENST00000561206 SNRPB2P08579 225 aaKnown RBP5.6□□□□□ -1.51
USP8-216ENST00000561206 CD38P28907 300 aa5.6□□□□□ -1.51
USP8-216ENST00000561206 GRM7Q14831 915 aa5.6□□□□□ -1.51
USP8-216ENST00000561206 GPR135Q8IZ08 494 aa5.6□□□□□ -1.51
USP8-216ENST00000561206 TACO1Q9BSH4 297 aaKnown RBP5.6□□□□□ -1.51
USP8-216ENST00000561206 ZDHHC5Q9C0B5 715 aa5.6□□□□□ -1.51
USP8-216ENST00000561206 NPFFR2Q9Y5X5 522 aa5.6□□□□□ -1.51
USP8-216ENST00000561206 CPP00450 1065 aa5.59□□□□□ -1.51
USP8-216ENST00000561206 CDK4P11802 303 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms