RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ATG7O95352 703 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 CHRNA1P02708 482 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 FDPSP14324 419 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 ATP4AP20648 1035 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 CIITAP33076 1130 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 ZNF76P36508 570 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 NLRP5P59047 1200 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 ANAPC15P60006 121 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 AKAP17AQ02040 695 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 PRR16Q569H4 304 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 EARS2Q5JPH6 523 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 CNKSR3Q6P9H4 555 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 ABHD15Q6UXT9 468 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 HERC6Q8IVU3 1022 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 CCDC148Q8NFR7 591 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 DBF4BQ8NFT6 615 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 OXER1Q8TDS5 423 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 GLG1Q92896 1179 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 KIF2CQ99661 725 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 MTIF3Q9H2K0 278 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 ERAP1Q9NZ08 941 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 RSPH10B2B2RC85 870 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 ZBTB42B2RXF5 422 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 RFXAPO00287 272 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 IPO5O00410 1097 aaKnown RBP14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 CPLX1O14810 134 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 JAK2O60674 1132 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 DEXIO95424 95 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 RSPH10BP0C881 870 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 INSRRP14616 1297 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 FOSL2P15408 326 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 FOSBP53539 338 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 RAB30Q15771 203 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 UGCGQ16739 394 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 TEX2Q8IWB9 1127 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 DAGLBQ8NCG7 672 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 MAFAQ8NHW3 353 aaPredicted RBP14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 TBCKQ8TEA7 893 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 CCDC12Q8WUD4 166 aaPredicted RBP14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 SDF4Q9BRK5 362 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 GLT8D2Q9H1C3 349 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 SLKQ9H2G2 1235 aaPredicted RBP14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 SMARCAD1Q9H4L7 1026 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 CERS4Q9HA82 394 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 PRDM6Q9NQX0 595 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 SH3GLB2Q9NR46 395 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 TUBE1Q9UJT0 475 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 PCDHA4Q9UN74 947 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 PCDHA11Q9Y5I1 949 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 NRCAMQ92823 1304 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
CHRNA3-208ENST00000561128 MSH4O15457 936 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 MAFGO15525 162 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 SLC37A4O43826 429 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 BAIAP3O94812 1187 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 ACTN1P12814 892 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 GNA11P29992 359 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 PLEKHG4Q58EX7 1191 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 FAM26DQ5JW98 314 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 PPP2R2DQ66LE6 453 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 KRT40Q6A162 431 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 FAM117BQ6P1L5 589 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 TRIM22Q8IYM9 498 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 BLIDQ8IZY5 108 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 NSUN7Q8NE18 718 aaKnown RBP14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 DNAJB3Q8WWF6 145 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 SLC9A7Q96T83 725 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 ZNF577Q9BSK1 485 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 PHF20Q9BVI0 1012 aa14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 FAM49AQ9H0Q0 323 aaPredicted RBP14.39□□□□□ -0.11
CHRNA3-208ENST00000561128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 WNT7AO00755 349 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 ZNF862O60290 1169 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 GHRP10912 638 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 TAP1Q03518 808 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 TMEM62Q0P6H9 643 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 LPIN1Q14693 890 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 LINC01599Q8WXQ3 324 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 GTF3C6Q969F1 213 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 MSRAQ9UJ68 235 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 TRPC6Q9Y210 931 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 IGSF9BQ9UPX0 1349 aa14.38□□□□□ -0.11
CHRNA3-208ENST00000561128 LOXHD1Q8IVV2 1947 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 STAT5BP51692 787 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 NEK4P51957 841 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 SETQ01105 290 aaPredicted RBP14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 INF2Q27J81 1249 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 SWSAP1Q6NVH7 229 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 TRMT1LQ7Z2T5 733 aaKnown RBP14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 MBOAT7Q96N66 472 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 UNC45AQ9H3U1 944 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 AGO3Q9H9G7 860 aaKnown RBP14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 SLC28A3Q9HAS3 691 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 ORC3Q9UBD5 711 aaPredicted RBP14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 CDY2AQ9Y6F7 541 aa14.37□□□□□ -0.11
CHRNA3-208ENST00000561128 POTEB3A0JP26 581 aa14.36□□□□□ -0.11
CHRNA3-208ENST00000561128 TMEM150BA6NC51 233 aa14.36□□□□□ -0.11
CHRNA3-208ENST00000561128 BACH1O14867 736 aa14.36□□□□□ -0.11
CHRNA3-208ENST00000561128 CHMP2AO43633 222 aa14.36□□□□□ -0.11
CHRNA3-208ENST00000561128 GNAT1P11488 350 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms