RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 MEIS1O00470 390 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 ARP10275 920 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 CPA1P15085 419 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 HSPA4P34932 840 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 ADD1P35611 737 aaKnown RBP18.52■□□□□ 0.55
SNX1-213ENST00000561026 SREBF1P36956 1147 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 CLK2P49760 499 aaKnown RBP18.52■□□□□ 0.55
SNX1-213ENST00000561026 AP3B2Q13367 1082 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 HLA-CQ95604 372 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 SDF4Q9BRK5 362 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 AZI2Q9H6S1 392 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 TMEM260Q9NX78 707 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 NAP1L2Q9ULW6 460 aaPredicted RBP18.52■□□□□ 0.55
SNX1-213ENST00000561026 BDP1A6H8Y1 2624 aa18.52■□□□□ 0.55
SNX1-213ENST00000561026 KAT6AQ92794 2004 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 RRN3P2A6NIE6 340 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 UPP2O95045 317 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 INSRRP14616 1297 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 METAP2P50579 478 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNX1-213ENST00000561026 KCNQ1P51787 676 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 ACTR2P61160 394 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 MGAT3Q09327 533 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 ITGB3BPQ13352 177 aaPredicted RBP18.51■□□□□ 0.55
SNX1-213ENST00000561026 PFKFB3Q16875 520 aaPredicted RBP18.51■□□□□ 0.55
SNX1-213ENST00000561026 Q6ZUG5 572 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 DNAJB3Q8WWF6 145 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 TNPO1Q92973 898 aaKnown RBP18.51■□□□□ 0.55
SNX1-213ENST00000561026 JAKMIP1Q96N16 626 aaKnown RBP18.51■□□□□ 0.55
SNX1-213ENST00000561026 YME1L1Q96TA2 773 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 C17orf80Q9BSJ5 609 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 AGO4Q9HCK5 861 aaKnown RBP18.51■□□□□ 0.55
SNX1-213ENST00000561026 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
SNX1-213ENST00000561026 GHRP10912 638 aa18.5■□□□□ 0.55
SNX1-213ENST00000561026 STAT5BP51692 787 aa18.5■□□□□ 0.55
SNX1-213ENST00000561026 IGBP1P78318 339 aa18.5■□□□□ 0.55
SNX1-213ENST00000561026 APOBRQ0VD83 1088 aa18.5■□□□□ 0.55
SNX1-213ENST00000561026 LPIN1Q14693 890 aa18.5■□□□□ 0.55
SNX1-213ENST00000561026 PLPPR4Q7Z2D5 763 aa18.5■□□□□ 0.55
SNX1-213ENST00000561026 FBXO22Q8NEZ5 403 aa18.5■□□□□ 0.55
SNX1-213ENST00000561026 BRF1Q92994 677 aa18.5■□□□□ 0.55
SNX1-213ENST00000561026 ATG7O95352 703 aa18.49■□□□□ 0.55
SNX1-213ENST00000561026 RPLP2P05387 115 aaKnown RBP18.49■□□□□ 0.55
SNX1-213ENST00000561026 SCG2P13521 617 aa18.49■□□□□ 0.55
SNX1-213ENST00000561026 BLOC1S2Q6QNY1 142 aa18.49■□□□□ 0.55
SNX1-213ENST00000561026 NIPA1Q7RTP0 329 aa18.49■□□□□ 0.55
SNX1-213ENST00000561026 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
SNX1-213ENST00000561026 ZBTB10Q96DT7 871 aa18.49■□□□□ 0.55
SNX1-213ENST00000561026 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
SNX1-213ENST00000561026 COL4A4P53420 1690 aaPredicted RBP18.49■□□□□ 0.55
SNX1-213ENST00000561026 ZNF76P36508 570 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 PLCB4Q15147 1175 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 EPC2Q52LR7 807 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 FBXO47Q5MNV8 452 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 JAKMIP3Q5VZ66 844 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 CRYGNQ8WXF5 182 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 SAMD11Q96NU1 681 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 NECAB3Q96P71 396 aaPredicted RBP18.48■□□□□ 0.55
SNX1-213ENST00000561026 ZMYND12Q9H0C1 365 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 TRPC6Q9Y210 931 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 CDY2AQ9Y6F7 541 aa18.48■□□□□ 0.55
SNX1-213ENST00000561026 ESYT2A0FGR8 921 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 FAM86B1E9PN63 330 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 CCNE2O96020 404 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 CYP3A4P08684 503 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 FAM86B2P0C5J1 330 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 RPS6KB1P23443 525 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 SLC26A2P50443 739 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 MRPS6P82932 125 aaKnown RBP18.47■□□□□ 0.55
SNX1-213ENST00000561026 PKN1Q16512 942 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 IER5Q5VY09 327 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 IL17RAQ96F46 866 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 FAM49AQ9H0Q0 323 aaPredicted RBP18.47■□□□□ 0.55
SNX1-213ENST00000561026 PCDHA2Q9Y5H9 948 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 SIP14410 1827 aa18.47■□□□□ 0.55
SNX1-213ENST00000561026 BRWD1Q9NSI6 2320 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 IGKV6D-21A0A0A0MT36 114 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 POTEB3A0JP26 581 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 ENPP3O14638 875 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 PRPF3O43395 683 aaKnown RBP18.46■□□□□ 0.55
SNX1-213ENST00000561026 REC8O95072 547 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 MCTP2Q6DN12 878 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 POTEBQ6S5H4 581 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 TSHZ1Q6ZSZ6 1077 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 PLA2G4DQ86XP0 818 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 TMEM192Q8IY95 271 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
SNX1-213ENST00000561026 AGO3Q9H9G7 860 aaKnown RBP18.46■□□□□ 0.55
SNX1-213ENST00000561026 C6orf50Q9HD87 102 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 NID2Q14112 1375 aa18.46■□□□□ 0.55
SNX1-213ENST00000561026 TCF20Q9UGU0 1960 aaKnown RBP18.46■□□□□ 0.54
SNX1-213ENST00000561026 IGLV3-22A0A075B6J6 115 aa18.45■□□□□ 0.54
SNX1-213ENST00000561026 H3BNC9 293 aa18.45■□□□□ 0.54
SNX1-213ENST00000561026 ADAMTS3O15072 1205 aa18.45■□□□□ 0.54
SNX1-213ENST00000561026 DHX15O43143 795 aaKnown RBP18.45■□□□□ 0.54
SNX1-213ENST00000561026 PSMA5P28066 241 aa18.45■□□□□ 0.54
SNX1-213ENST00000561026 PTPROQ16827 1216 aa18.45■□□□□ 0.54
SNX1-213ENST00000561026 ABHD15Q6UXT9 468 aa18.45■□□□□ 0.54
SNX1-213ENST00000561026 TRAPPC12Q8WVT3 735 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms