RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 MAD2L2Q9UI95 211 aa18■□□□□ 0.47
TPM1-228ENST00000560975 UTP11Q9Y3A2 253 aaKnown RBP18■□□□□ 0.47
TPM1-228ENST00000560975 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18■□□□□ 0.47
TPM1-228ENST00000560975 ABCB11O95342 1321 aa18■□□□□ 0.47
TPM1-228ENST00000560975 USP17L3A6NCW0 530 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 USP17L4A6NCW7 530 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 POTEMA6NI47 508 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 PCP11498 1178 aaKnown RBP17.99■□□□□ 0.47
TPM1-228ENST00000560975 IL2RBP14784 551 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 BZW1Q7L1Q6 419 aaKnown RBP17.99■□□□□ 0.47
TPM1-228ENST00000560975 USP17L1Q7RTZ2 530 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 ZNF571Q7Z3V5 609 aaPredicted RBP17.99■□□□□ 0.47
TPM1-228ENST00000560975 DAAM2Q86T65 1068 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 TAX1BP1Q86VP1 789 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 MAB21L3Q8N8X9 362 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 TLCD1Q96CP7 247 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 PRMT1Q99873 361 aaKnown RBP17.99■□□□□ 0.47
TPM1-228ENST00000560975 NUDT12Q9BQG2 462 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 CCDC113Q9H0I3 377 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 IL17RBQ9NRM6 502 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 SAMD15Q9P1V8 674 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 SLC12A4Q9UP95 1085 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 CICQ96RK0 1608 aaPredicted RBP17.99■□□□□ 0.47
TPM1-228ENST00000560975 EME2A4GXA9 379 aaPredicted RBP17.99■□□□□ 0.47
TPM1-228ENST00000560975 KCNK18Q7Z418 384 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 MYOCDQ8IZQ8 938 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 CCDC26Q8TAB7 109 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 MICAL1Q8TDZ2 1067 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 FMO2Q99518 471 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 VAT1LQ9HCJ6 419 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 PRDM11Q9NQV5 511 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 BIN2Q9UBW5 565 aaPredicted RBP17.99■□□□□ 0.47
TPM1-228ENST00000560975 TRPC6Q9Y210 931 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 NR2E1Q9Y466 385 aa17.99■□□□□ 0.47
TPM1-228ENST00000560975 IFI35P80217 286 aaPredicted RBP17.98■□□□□ 0.47
TPM1-228ENST00000560975 FKBP3Q00688 224 aaKnown RBP17.98■□□□□ 0.47
TPM1-228ENST00000560975 PRPF4BQ13523 1007 aaKnown RBP17.98■□□□□ 0.47
TPM1-228ENST00000560975 TRPM8Q7Z2W7 1104 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 NEK8Q86SG6 692 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 DYNLL2Q96FJ2 89 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 SPAG5Q96R06 1193 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 FGFBP2Q9BYJ0 223 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 AZI2Q9H6S1 392 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 PVALEFA0A1B0GWK0 134 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 USP17L8P0C7I0 530 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 IRX1P78414 480 aaPredicted RBP17.98■□□□□ 0.47
TPM1-228ENST00000560975 BIRC2Q13490 618 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 ZKSCAN8Q15776 578 aaPredicted RBP17.98■□□□□ 0.47
TPM1-228ENST00000560975 LRRC57Q8N9N7 239 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 CALR3Q96L12 384 aaKnown RBP17.98■□□□□ 0.47
TPM1-228ENST00000560975 MCM9Q9NXL9 1143 aa17.98■□□□□ 0.47
TPM1-228ENST00000560975 SMCO2A6NFE2 343 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 A8MUI8 341 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 KIF2BQ8N4N8 673 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 ZNF570Q96NI8 536 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 UIMC1Q96RL1 719 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 TMEM260Q9NX78 707 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 STX8Q9UNK0 236 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 COL1A1P02452 1464 aaPredicted RBP17.97■□□□□ 0.47
TPM1-228ENST00000560975 HGSO14964 777 aaPredicted RBP17.97■□□□□ 0.47
TPM1-228ENST00000560975 UBOX5O94941 541 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 SLCO1A2P46721 670 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
TPM1-228ENST00000560975 SPICE1Q8N0Z3 855 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 DAGLBQ8NCG7 672 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 ARMC2Q8NEN0 867 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 TPCN2Q8NHX9 752 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 ATXN2LQ8WWM7 1075 aaKnown RBP17.97■□□□□ 0.47
TPM1-228ENST00000560975 INTS9Q9NV88 658 aaKnown RBP17.97■□□□□ 0.47
TPM1-228ENST00000560975 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 SPDYE3A6NKU9 549 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 ENO4A6NNW6 628 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 CCDC188H7C350 402 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 CES2O00748 559 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 FGGP02679 453 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 GRIK3Q13003 919 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 ALKBH5Q6P6C2 394 aaKnown RBP17.97■□□□□ 0.47
TPM1-228ENST00000560975 PIGWQ7Z7B1 504 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 CRNKL1Q9BZJ0 848 aaKnown RBP17.97■□□□□ 0.47
TPM1-228ENST00000560975 FAM114A2Q9NRY5 505 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 STK38LQ9Y2H1 464 aa17.97■□□□□ 0.47
TPM1-228ENST00000560975 ALDH5A1P51649 535 aaPredicted RBP17.96■□□□□ 0.47
TPM1-228ENST00000560975 GRM4Q14833 912 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 UBAP2Q5T6F2 1119 aaKnown RBP17.96■□□□□ 0.47
TPM1-228ENST00000560975 KRT25Q7Z3Z0 450 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 HOOK3Q86VS8 718 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 SNX29Q8TEQ0 813 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 RIC8AQ9NPQ8 531 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 NOP53Q9NZM5 478 aaKnown RBP17.96■□□□□ 0.47
TPM1-228ENST00000560975 AIPL1Q9NZN9 384 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 BHMG1C9JSJ3 638 aaPredicted RBP17.96■□□□□ 0.47
TPM1-228ENST00000560975 CYP19A1P11511 503 aaPredicted RBP17.96■□□□□ 0.47
TPM1-228ENST00000560975 SLC9A1P19634 815 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 PLTPP55058 493 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 SARNPP82979 210 aaKnown RBP17.96■□□□□ 0.47
TPM1-228ENST00000560975 CCDC152Q4G0S7 254 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms