RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ITGB1P05556 798 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 TCF7P36402 384 aaPredicted RBP21.37■■□□□ 1.01
TPM1-226ENST00000560959 TROAPQ12815 778 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 TRDNQ13061 729 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 PPFIA1Q13136 1202 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 AAMPQ13685 434 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 IER5LQ5T953 404 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 NPAS4Q8IUM7 802 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 SUGP1Q8IWZ8 645 aaKnown RBP21.37■■□□□ 1.01
TPM1-226ENST00000560959 SMC5Q8IY18 1101 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 TELO2Q9Y4R8 837 aa21.37■■□□□ 1.01
TPM1-226ENST00000560959 SUPT16HQ9Y5B9 1047 aaKnown RBP21.37■■□□□ 1.01
TPM1-226ENST00000560959 MRPL42Q9Y6G3 142 aaKnown RBP21.37■■□□□ 1.01
TPM1-226ENST00000560959 STAG3L1P0CL83 205 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 DNAJB1P25685 340 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
TPM1-226ENST00000560959 GRIK4Q16099 956 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 MARCH8Q5T0T0 291 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 IER5Q5VY09 327 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 DNAJB3Q8WWF6 145 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 CUL5Q93034 780 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 GPRASP2Q96D09 838 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 PHOX2BQ99453 314 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 CDY2AQ9Y6F7 541 aa21.36■■□□□ 1.01
TPM1-226ENST00000560959 ERICH2A1L162 156 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 FSD2A1L4K1 749 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 RRN3P2A6NIE6 340 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 RTN4RL1Q86UN2 441 aaPredicted RBP21.35■■□□□ 1.01
TPM1-226ENST00000560959 FBXL6Q8N531 539 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 KLHL23Q8NBE8 558 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 SMARCC2Q8TAQ2 1214 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 POF1BQ8WVV4 589 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 TNPO1Q92973 898 aaKnown RBP21.35■■□□□ 1.01
TPM1-226ENST00000560959 PHF7Q9BWX1 381 aaPredicted RBP21.35■■□□□ 1.01
TPM1-226ENST00000560959 IRF2BPLQ9H1B7 796 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 SMARCAD1Q9H4L7 1026 aa21.35■■□□□ 1.01
TPM1-226ENST00000560959 AGO3Q9H9G7 860 aaKnown RBP21.35■■□□□ 1.01
TPM1-226ENST00000560959 ATG2AQ2TAZ0 1938 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 GSTTP1A0A1W2PQM5 241 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 MEIS2O14770 477 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 IFIT3O14879 490 aaKnown RBP21.34■■□□□ 1.01
TPM1-226ENST00000560959 MAFGO15525 162 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 KCNA2P16389 499 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 ATF7P17544 494 aaPredicted RBP21.34■■□□□ 1.01
TPM1-226ENST00000560959 SMARCA1P28370 1054 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 MRPS6P82932 125 aaKnown RBP21.34■■□□□ 1.01
TPM1-226ENST00000560959 SP4Q02446 784 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 TCF15Q12870 199 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 CHD1LQ86WJ1 897 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 LINC01599Q8WXQ3 324 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 MAP3K14Q99558 947 aa21.34■■□□□ 1.01
TPM1-226ENST00000560959 CD52P31358 61 aa21.33■■□□□ 1.01
TPM1-226ENST00000560959 UBE3AQ05086 875 aa21.33■■□□□ 1.01
TPM1-226ENST00000560959 SIGLEC14Q08ET2 396 aa21.33■■□□□ 1.01
TPM1-226ENST00000560959 ADGRD2Q7Z7M1 963 aa21.33■■□□□ 1.01
TPM1-226ENST00000560959 RWDD1Q9H446 243 aaPredicted RBP21.33■■□□□ 1.01
TPM1-226ENST00000560959 ATP9AO75110 1047 aa21.32■■□□□ 1
TPM1-226ENST00000560959 GLP2RO95838 553 aa21.32■■□□□ 1
TPM1-226ENST00000560959 NRIP1P48552 1158 aa21.32■■□□□ 1
TPM1-226ENST00000560959 SART3Q15020 963 aaKnown RBP21.32■■□□□ 1
TPM1-226ENST00000560959 USP17L6PQ6QN14 398 aa21.32■■□□□ 1
TPM1-226ENST00000560959 GLG1Q92896 1179 aa21.32■■□□□ 1
TPM1-226ENST00000560959 CDCA3Q99618 268 aaPredicted RBP21.32■■□□□ 1
TPM1-226ENST00000560959 SPZ1Q9BXG8 430 aa21.32■■□□□ 1
TPM1-226ENST00000560959 PADI3Q9ULW8 664 aa21.32■■□□□ 1
TPM1-226ENST00000560959 USP15Q9Y4E8 981 aaPredicted RBP21.32■■□□□ 1
TPM1-226ENST00000560959 U3KPZ7 1027 aaPredicted RBP21.32■■□□□ 1
TPM1-226ENST00000560959 KAT6AQ92794 2004 aa21.31■■□□□ 1
TPM1-226ENST00000560959 M0QZ92 97 aa21.31■■□□□ 1
TPM1-226ENST00000560959 MARK3P27448 753 aa21.31■■□□□ 1
TPM1-226ENST00000560959 NUBP1P53384 320 aa21.31■■□□□ 1
TPM1-226ENST00000560959 NUCB1Q02818 461 aa21.31■■□□□ 1
TPM1-226ENST00000560959 WTAPQ15007 396 aa21.31■■□□□ 1
TPM1-226ENST00000560959 CATIPQ7Z7H3 387 aa21.31■■□□□ 1
TPM1-226ENST00000560959 NME8Q8N427 588 aa21.31■■□□□ 1
TPM1-226ENST00000560959 ATP8B4Q8TF62 1192 aa21.31■■□□□ 1
TPM1-226ENST00000560959 SUSD6Q92537 303 aa21.31■■□□□ 1
TPM1-226ENST00000560959 TLE6Q9H808 572 aa21.31■■□□□ 1
TPM1-226ENST00000560959 RNF216Q9NWF9 866 aaPredicted RBP21.31■■□□□ 1
TPM1-226ENST00000560959 IGSF9BQ9UPX0 1349 aa21.3■■□□□ 1
TPM1-226ENST00000560959 KDM3AQ9Y4C1 1321 aa21.3■■□□□ 1
TPM1-226ENST00000560959 CSPG5O95196 566 aa21.3■■□□□ 1
TPM1-226ENST00000560959 SCG2P13521 617 aa21.3■■□□□ 1
TPM1-226ENST00000560959 INSRRP14616 1297 aa21.3■■□□□ 1
TPM1-226ENST00000560959 PDE12Q6L8Q7 609 aaKnown RBP21.3■■□□□ 1
TPM1-226ENST00000560959 RRP36Q96EU6 259 aaKnown RBP21.3■■□□□ 1
TPM1-226ENST00000560959 SENP2Q9HC62 589 aa21.3■■□□□ 1
TPM1-226ENST00000560959 BARX2Q9UMQ3 279 aaPredicted RBP21.3■■□□□ 1
TPM1-226ENST00000560959 PCDHA2Q9Y5H9 948 aa21.3■■□□□ 1
TPM1-226ENST00000560959 TRPV2Q9Y5S1 764 aa21.3■■□□□ 1
TPM1-226ENST00000560959 ITGB5P18084 799 aa21.29■■□□□ 1
TPM1-226ENST00000560959 B4GALNT3Q6L9W6 998 aa21.29■■□□□ 1
TPM1-226ENST00000560959 TMEM184AQ6ZMB5 413 aa21.29■■□□□ 1
TPM1-226ENST00000560959 RBM23Q86U06 439 aaKnown RBP21.29■■□□□ 1
TPM1-226ENST00000560959 ASIC4Q96FT7 647 aa21.29■■□□□ 1
TPM1-226ENST00000560959 LZTS2Q9BRK4 669 aa21.29■■□□□ 1
TPM1-226ENST00000560959 AAASQ9NRG9 546 aa21.29■■□□□ 1
TPM1-226ENST00000560959 PCDHB12Q9Y5F1 795 aa21.29■■□□□ 1
TPM1-226ENST00000560959 UBIAD1Q9Y5Z9 338 aa21.29■■□□□ 1
TPM1-226ENST00000560959 BAZ2BQ9UIF8 2168 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms