RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 SPATA31E1Q6ZUB1 1445 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 MYO5CQ9NQX4 1742 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 NCF2P19878 526 aaPredicted RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 EXOC8Q8IYI6 725 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 PYROXD1Q8WU10 500 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 N4BP2L2Q92802 583 aaPredicted RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 APBA3O96018 575 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 FGGP02679 453 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 BMP3P12645 472 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 DDIT3P35638 169 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 ALCAMQ13740 583 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 PDIK1LQ8N165 341 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 CCDC124Q96CT7 223 aaKnown RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 AIFM3Q96NN9 605 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 USP21Q9UK80 565 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 ZNF233A6NK53 670 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 KCTD2Q14681 263 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 OR6B2Q6IFH4 312 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 NUDCD1Q96RS6 583 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 ADAMTS1Q9UHI8 967 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 IGSF1Q8N6C5 1336 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 LOC102724428A0A0B4J2F2 783 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 PODXLO00592 558 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 ACSL3O95573 720 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 POLE2P56282 527 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 SIK1P57059 783 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 TOGARAM2Q6ZUX3 1019 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 GINM1Q9NU53 330 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 NXF1Q9UBU9 619 aaKnown RBP13.62□□□□□ -0.23
SYNM-203ENST00000560674 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 MAGED2Q9UNF1 606 aaPredicted RBP13.62□□□□□ -0.23
SYNM-203ENST00000560674 PPEF1O14829 653 aaPredicted RBP13.62□□□□□ -0.23
SYNM-203ENST00000560674 DCTN3O75935 186 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 USP17L2Q6R6M4 530 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 TBC1D1Q86TI0 1168 aaPredicted RBP13.62□□□□□ -0.23
SYNM-203ENST00000560674 TRAIPQ9BWF2 469 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.62□□□□□ -0.23
SYNM-203ENST00000560674 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 CCND2P30279 289 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 SLC12A1Q13621 1099 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 TERF2Q15554 542 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 CDHR1Q96JP9 859 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
SYNM-203ENST00000560674 PIP4K2CQ8TBX8 421 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
SYNM-203ENST00000560674 ELAC2Q9BQ52 826 aaKnown RBP13.62□□□□□ -0.23
SYNM-203ENST00000560674 USP14P54578 494 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 PTPN12Q05209 780 aaKnown RBP13.61□□□□□ -0.23
SYNM-203ENST00000560674 ARID5BQ14865 1188 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 UBE2SQ16763 222 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 METTL23Q86XA0 190 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 CHMP6Q96FZ7 201 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 FGD4Q96M96 766 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 ANLNQ9NQW6 1124 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 INTUQ9ULD6 942 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 TYW5A2RUC4 315 aaKnown RBP13.61□□□□□ -0.23
SYNM-203ENST00000560674 NVLO15381 856 aaKnown RBP13.61□□□□□ -0.23
SYNM-203ENST00000560674 STAT2P52630 851 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 NOP53Q9NZM5 478 aaKnown RBP13.61□□□□□ -0.23
SYNM-203ENST00000560674 SCINQ9Y6U3 715 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 WDR17Q8IZU2 1322 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 CFLARO15519 480 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 ZBED1O96006 694 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 MMEP08473 750 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 GDF11O95390 407 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 CD58P19256 250 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 EEF1B2P24534 225 aaKnown RBP13.61□□□□□ -0.23
SYNM-203ENST00000560674 SIRT2Q8IXJ6 389 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 PITPNM3Q9BZ71 974 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 SH3GLB2Q9NR46 395 aa13.61□□□□□ -0.23
SYNM-203ENST00000560674 G3BP2Q9UN86 482 aaKnown RBP13.61□□□□□ -0.23
SYNM-203ENST00000560674 PALMO75781 387 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 LMNAP02545 664 aaKnown RBP13.6□□□□□ -0.23
SYNM-203ENST00000560674 MAGEA9P43362 315 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 PDCLQ13371 301 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 SPARCL1Q14515 664 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.6□□□□□ -0.23
SYNM-203ENST00000560674 ST13P4Q8IZP2 240 aaPredicted RBP13.6□□□□□ -0.23
SYNM-203ENST00000560674 ABHD10Q9NUJ1 306 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 DNAJC17Q9NVM6 304 aaKnown RBP13.6□□□□□ -0.23
SYNM-203ENST00000560674 SYT2Q8N9I0 419 aaPredicted RBP13.6□□□□□ -0.23
SYNM-203ENST00000560674 KRT82Q9NSB4 513 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 ADD3Q9UEY8 706 aaKnown RBP13.6□□□□□ -0.23
SYNM-203ENST00000560674 TADA3O75528 432 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 SURF1Q15526 300 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 E2F4Q16254 413 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 SRRM1Q8IYB3 904 aaKnown RBP13.6□□□□□ -0.23
SYNM-203ENST00000560674 C7orf31Q8N865 590 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 LRRC4Q9HBW1 653 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 CEP72Q9P209 647 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 SLC12A6Q9UHW9 1150 aa13.6□□□□□ -0.23
SYNM-203ENST00000560674 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms