RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 MAML3Q96JK9 1138 aa9.61□□□□□ -0.87
TRAF3-209ENST00000560463 LXNQ9BS40 222 aa9.61□□□□□ -0.87
TRAF3-209ENST00000560463 RBSNQ9H1K0 784 aa9.61□□□□□ -0.87
TRAF3-209ENST00000560463 DNAJC25Q9H1X3 360 aa9.61□□□□□ -0.87
TRAF3-209ENST00000560463 PKD2L1Q9P0L9 805 aa9.61□□□□□ -0.87
TRAF3-209ENST00000560463 SAMM50Q9Y512 469 aa9.61□□□□□ -0.87
TRAF3-209ENST00000560463 RBM47A0AV96 593 aaKnown RBP9.6□□□□□ -0.87
TRAF3-209ENST00000560463 MYMKA6NI61 221 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 SMTNL1A8MU46 457 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 BIN1O00499 593 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 KLRC4O43908 158 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 SLC12A3P55017 1021 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 PSMC5P62195 406 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 GRM1Q13255 1194 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 CTTNQ14247 550 aaKnown RBP9.6□□□□□ -0.87
TRAF3-209ENST00000560463 DHX8Q14562 1220 aaKnown RBP9.6□□□□□ -0.87
TRAF3-209ENST00000560463 TTLL4Q14679 1199 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 DPCR1Q3MIW9 517 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 MIS18BP1Q6P0N0 1132 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 ABHD15Q6UXT9 468 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 UNC13DQ70J99 1090 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 KCNK18Q7Z418 384 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 USP6NLQ92738 828 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 DDX12PQ92771 950 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 ATP6V0A1Q93050 837 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 TINF2Q9BSI4 451 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 BLZF1Q9H2G9 400 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 ABHD16BQ9H3Z7 469 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 RGL1Q9NZL6 768 aa9.6□□□□□ -0.87
TRAF3-209ENST00000560463 DDX41Q9UJV9 622 aaKnown RBP9.6□□□□□ -0.87
TRAF3-209ENST00000560463 DBR1Q9UK59 544 aaKnown RBP9.6□□□□□ -0.87
TRAF3-209ENST00000560463 BECN2A8MW95 431 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 TNPO2O14787 897 aaKnown RBP9.59□□□□□ -0.87
TRAF3-209ENST00000560463 IKBKBO14920 756 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 AOC2O75106 756 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 FARP2O94887 1054 aaPredicted RBP9.59□□□□□ -0.87
TRAF3-209ENST00000560463 CCNE2O96020 404 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 TXNP10599 105 aaKnown RBP9.59□□□□□ -0.87
TRAF3-209ENST00000560463 CYP11B2P19099 503 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 UBA1P22314 1058 aaKnown RBP9.59□□□□□ -0.87
TRAF3-209ENST00000560463 ERCC5P28715 1186 aaPredicted RBP9.59□□□□□ -0.87
TRAF3-209ENST00000560463 CASP1P29466 404 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 RGS2P41220 211 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 ACTR2P61160 394 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 PSMC6P62333 389 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 ASIC1P78348 528 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 SP2Q02086 613 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 STIM1Q13586 685 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 IQCB1Q15051 598 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 COBLL1Q53SF7 1204 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 CCDC62Q6P9F0 684 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 METTL7BQ6UX53 244 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 C11orf57Q6ZUT1 292 aaPredicted RBP9.59□□□□□ -0.87
TRAF3-209ENST00000560463 CYFIP1Q7L576 1253 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 OTUD6AQ7L8S5 288 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 CCDC65Q8IXS2 484 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 BANK1Q8NDB2 785 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 ANP32BQ92688 251 aaKnown RBP9.59□□□□□ -0.87
TRAF3-209ENST00000560463 DNAJC19Q96DA6 116 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 ZIC5Q96T25 663 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 TIPINQ9BVW5 301 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 BHMT2Q9H2M3 363 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 CBX8Q9HC52 389 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 ANKEF1Q9NU02 776 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 EXOC1Q9NV70 894 aa9.59□□□□□ -0.87
TRAF3-209ENST00000560463 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.87
TRAF3-209ENST00000560463 IGKV6D-21A0A0A0MT36 114 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 FRMD3A2A2Y4 597 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 GOLGA6L19H0YKK7 550 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 NKRFO15226 690 aaKnown RBP eCLIP9.58□□□□□ -0.882e-9■□□□□ 10.5
TRAF3-209ENST00000560463 GGPS1O95749 300 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 SNAI1O95863 264 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-209ENST00000560463 SSBP05455 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
TRAF3-209ENST00000560463 KRT18P05783 430 aaKnown RBP9.58□□□□□ -0.88
TRAF3-209ENST00000560463 SUPT20HL2P0C7V6 817 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 BMP6P22004 513 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 YWHABP31946 246 aaKnown RBP9.58□□□□□ -0.88
TRAF3-209ENST00000560463 FCGRTP55899 365 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 TPM4P67936 248 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 KIF22Q14807 665 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 LY6KQ17RY6 165 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 ARSHQ5FYA8 562 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 CELF3Q5SZQ8 465 aaKnown RBP9.58□□□□□ -0.88
TRAF3-209ENST00000560463 FAM160B1Q5W0V3 765 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 OLFML2BQ68BL8 750 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 IQSEC1Q6DN90 963 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 ISM2Q6H9L7 571 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 RINT1Q6NUQ1 792 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 TAPT1Q6NXT6 567 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 EEPD1Q7L9B9 569 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 DYMQ7RTS9 669 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 GPBP1Q86WP2 473 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 FBXO16Q8IX29 292 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-209ENST00000560463 DHX37Q8IY37 1157 aaKnown RBP9.58□□□□□ -0.88
TRAF3-209ENST00000560463 RNF214Q8ND24 703 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 AFAP1L1Q8TED9 768 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 PIGOQ8TEQ8 1089 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 SEPT1Q8WYJ6 367 aa9.58□□□□□ -0.88
TRAF3-209ENST00000560463 EMID1Q96A84 441 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms