RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 GTPBP6O43824 516 aaPredicted RBP28.66■■■□□ 2.18
CRNDE-206ENST00000559432 CYP3A4P08684 503 aa28.66■■■□□ 2.18
CRNDE-206ENST00000559432 STAT5BP51692 787 aa28.66■■■□□ 2.18
CRNDE-206ENST00000559432 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.66■■■□□ 2.18
CRNDE-206ENST00000559432 RUFY4Q6ZNE9 571 aa28.66■■■□□ 2.18
CRNDE-206ENST00000559432 PLPPR4Q7Z2D5 763 aa28.66■■■□□ 2.18
CRNDE-206ENST00000559432 RPAINQ86UA6 219 aa28.66■■■□□ 2.18
CRNDE-206ENST00000559432 COL25A1Q9BXS0 654 aaPredicted RBP28.66■■■□□ 2.18
CRNDE-206ENST00000559432 UPF3BQ9BZI7 483 aaKnown RBP28.66■■■□□ 2.18
CRNDE-206ENST00000559432 FAM86B1E9PN63 330 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 DDX39AO00148 427 aaKnown RBP28.65■■■□□ 2.18
CRNDE-206ENST00000559432 CPLX1O14810 134 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 ARHGEF15O94989 841 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 FAM86B2P0C5J1 330 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 INSRRP14616 1297 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 MYOCDQ8IZQ8 938 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 MICALL1Q8N3F8 863 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 APBB2Q92870 758 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 VPS54Q9P1Q0 977 aa28.65■■■□□ 2.18
CRNDE-206ENST00000559432 LCHNA4D1U4 455 aa28.64■■■□□ 2.18
CRNDE-206ENST00000559432 MBLAC1A4D2B0 266 aaPredicted RBP28.64■■■□□ 2.18
CRNDE-206ENST00000559432 RFXAPO00287 272 aa28.64■■■□□ 2.18
CRNDE-206ENST00000559432 RPLP2P05387 115 aaKnown RBP28.64■■■□□ 2.18
CRNDE-206ENST00000559432 SETQ01105 290 aaPredicted RBP28.64■■■□□ 2.18
CRNDE-206ENST00000559432 SSRP1Q08945 709 aaKnown RBP28.64■■■□□ 2.18
CRNDE-206ENST00000559432 CRYGNQ8WXF5 182 aa28.64■■■□□ 2.18
CRNDE-206ENST00000559432 ZNF274Q96GC6 653 aaPredicted RBP28.64■■■□□ 2.18
CRNDE-206ENST00000559432 IFIH1Q9BYX4 1025 aaKnown RBP28.64■■■□□ 2.18
CRNDE-206ENST00000559432 PDRG1Q9NUG6 133 aa28.64■■■□□ 2.18
CRNDE-206ENST00000559432 PTPRSQ13332 1948 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 IGLV3-22A0A075B6J6 115 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 IPO5O00410 1097 aaKnown RBP28.63■■■□□ 2.17
CRNDE-206ENST00000559432 BACH1O14867 736 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 ADAMTS3O15072 1205 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 ATG7O95352 703 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 SLC26A2P50443 739 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 PLCB4Q15147 1175 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 MARCH8Q5T0T0 291 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 CPLX2Q6PUV4 134 aaKnown RBP28.63■■■□□ 2.17
CRNDE-206ENST00000559432 DNAJB3Q8WWF6 145 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 ZNF577Q9BSK1 485 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 OSBPL7Q9BZF2 842 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 SH3GLB2Q9NR46 395 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 TCEAL9Q9UHQ7 104 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 INSL6Q9Y581 213 aa28.63■■■□□ 2.17
CRNDE-206ENST00000559432 RBAK-RBAKDNI3L0D1 243 aa28.62■■■□□ 2.17
CRNDE-206ENST00000559432 CHRNA1P02708 482 aa28.62■■■□□ 2.17
CRNDE-206ENST00000559432 NLRP5P59047 1200 aa28.62■■■□□ 2.17
CRNDE-206ENST00000559432 MKRN4PQ13434 485 aaPredicted RBP28.62■■■□□ 2.17
CRNDE-206ENST00000559432 FAM160B1Q5W0V3 765 aa28.62■■■□□ 2.17
CRNDE-206ENST00000559432 MIS18BP1Q6P0N0 1132 aa28.62■■■□□ 2.17
CRNDE-206ENST00000559432 RASGRP4Q8TDF6 673 aa28.62■■■□□ 2.17
CRNDE-206ENST00000559432 TSPYL2Q9H2G4 693 aaPredicted RBP28.62■■■□□ 2.17
CRNDE-206ENST00000559432 PRDM6Q9NQX0 595 aa28.62■■■□□ 2.17
CRNDE-206ENST00000559432 TBC1D22BQ9NU19 505 aa28.62■■■□□ 2.17
CRNDE-206ENST00000559432 EPOPA6NHQ4 379 aa28.61■■■□□ 2.17
CRNDE-206ENST00000559432 CCNE2O96020 404 aa28.61■■■□□ 2.17
CRNDE-206ENST00000559432 GHRP10912 638 aa28.61■■■□□ 2.17
CRNDE-206ENST00000559432 LARP6Q9BRS8 491 aaKnown RBP28.61■■■□□ 2.17
CRNDE-206ENST00000559432 FAM49AQ9H0Q0 323 aaPredicted RBP28.61■■■□□ 2.17
CRNDE-206ENST00000559432 THEGQ9P2T0 379 aa28.61■■■□□ 2.17
CRNDE-206ENST00000559432 POTEB3A0JP26 581 aa28.6■■■□□ 2.17
CRNDE-206ENST00000559432 POU3F3P20264 500 aaPredicted RBP28.6■■■□□ 2.17
CRNDE-206ENST00000559432 STK3Q13188 491 aa28.6■■■□□ 2.17
CRNDE-206ENST00000559432 PRR16Q569H4 304 aa28.6■■■□□ 2.17
CRNDE-206ENST00000559432 POTEBQ6S5H4 581 aa28.6■■■□□ 2.17
CRNDE-206ENST00000559432 ABHD15Q6UXT9 468 aa28.6■■■□□ 2.17
CRNDE-206ENST00000559432 SYMPKQ92797 1274 aaKnown RBP28.6■■■□□ 2.17
CRNDE-206ENST00000559432 UIMC1Q96RL1 719 aa28.6■■■□□ 2.17
CRNDE-206ENST00000559432 TGS1Q96RS0 853 aaKnown RBP28.6■■■□□ 2.17
CRNDE-206ENST00000559432 CHD9Q3L8U1 2897 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 IGKV6D-21A0A0A0MT36 114 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 LINC01553A4QN01 128 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 M0QZ92 97 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 DEXIO95424 95 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 MGAT3Q09327 533 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 IER5Q5VY09 327 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 ZNF302Q9NR11 478 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 MTCH2Q9Y6C9 303 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 CDY2AQ9Y6F7 541 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 KAT6AQ92794 2004 aa28.59■■■□□ 2.17
CRNDE-206ENST00000559432 EYSQ5T1H1 3165 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 DHX15O43143 795 aaKnown RBP28.58■■■□□ 2.17
CRNDE-206ENST00000559432 MRPS6P82932 125 aaKnown RBP28.58■■■□□ 2.17
CRNDE-206ENST00000559432 GRB10Q13322 594 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 TJAP1Q5JTD0 557 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 PDXDC2PQ6P474 469 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 SPRED2Q7Z698 418 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 TRAPPC12Q8WVT3 735 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 ATXN2LQ8WWM7 1075 aaKnown RBP28.58■■■□□ 2.17
CRNDE-206ENST00000559432 TOP1MTQ969P6 601 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 ZBTB10Q96DT7 871 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 MTUS1Q9ULD2 1270 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 PCDHA2Q9Y5H9 948 aa28.58■■■□□ 2.17
CRNDE-206ENST00000559432 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.57■■■□□ 2.16
CRNDE-206ENST00000559432 UPP2O95045 317 aa28.57■■■□□ 2.16
CRNDE-206ENST00000559432 CIITAP33076 1130 aa28.57■■■□□ 2.16
CRNDE-206ENST00000559432 HTRA4P83105 476 aaPredicted RBP28.57■■■□□ 2.16
CRNDE-206ENST00000559432 LPIN1Q14693 890 aa28.57■■■□□ 2.16
CRNDE-206ENST00000559432 SKIV2LQ15477 1246 aaKnown RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms