RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SEC63Q9UGP8 760 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 ELP1O95163 1332 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 SCN10AQ9Y5Y9 1956 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 TRIM43BA6NCK2 446 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 GOLGA8AA7E2F4 631 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 GOLGA8BA8MQT2 603 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 GCOM1H8Y6P7 765 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 MEIS2O14770 477 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 GRIN2DO15399 1336 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 RGS20O76081 388 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 POLR2MP0CAP2 368 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 TXNP10599 105 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 CASTP20810 708 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 SERPINB4P48594 390 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 CDK7P50613 346 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 RCAN1P53805 252 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 APOBRQ0VD83 1088 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 NID2Q14112 1375 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 FRMPD4Q14CM0 1322 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 PGM5Q15124 567 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 STXBP2Q15833 593 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 CXCL17Q6UXB2 119 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 SYNE3Q6ZMZ3 975 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 SEPT14Q6ZU15 432 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 Q6ZUG5 572 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 ANKRD33Q7Z3H0 272 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 FCHSD1Q86WN1 690 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 FBXL16Q8N461 479 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 TSEN2Q8NCE0 465 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 OR6J1Q8NGC5 347 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 BRF1Q92994 677 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 TRIM43Q96BQ3 446 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 RBM28Q9NW13 759 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 A0A0U1RQG5 324 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 NKRFO15226 690 aaKnown RBP eCLIP6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 PQBP1O60828 265 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 EIF3JO75822 258 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 CLTBP09497 229 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 ITGB8P26012 769 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 BMP8BP34820 402 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 FXR1P51114 621 aaKnown RBP eCLIP6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 FGD1P98174 961 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 TTLL4Q14679 1199 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 LY6KQ17RY6 165 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 USP17L6PQ6QN14 398 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 VSIG10LQ86VR7 867 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 SLC43A3Q8NBI5 491 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 TOX2Q96NM4 488 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 CDK15Q96Q40 435 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 PRDM5Q9NQX1 630 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 MYH7BA7E2Y1 1941 aa6.93□□□□□ -1.3
CTDSPL2-204ENST00000558966 A0A1W2PPC1 479 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 ARVCFO00192 962 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 SIAH2O43255 324 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 MYCLP12524 364 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 PSMA5P28066 241 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 ADD1P35611 737 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 METAP2P50579 478 aaKnown RBP eCLIP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 PSMC6P62333 389 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 MRPS9P82933 396 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 PURAQ00577 322 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 ARHGAP1Q07960 439 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 TOB2Q14106 344 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 OCLNQ16625 522 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 WWC2Q6AWC2 1192 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 RUFY3Q7L099 469 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 HEATR3Q7Z4Q2 680 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 FAM126BQ8IXS8 530 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 VTI1AQ96AJ9 217 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 UPF3BQ9BZI7 483 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 DDX41Q9UJV9 622 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 TBX21Q9UL17 535 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 NAP1L2Q9ULW6 460 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 DOCK5Q9H7D0 1870 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 STXBP3O00186 592 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 KIAA0355O15063 1070 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 ZEB2O60315 1214 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 CABYRO75952 493 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 GH1P01241 217 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 CD4P01730 458 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 CCND2P30279 289 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 CPT1AP50416 773 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 EVCP57679 992 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 ITGA7Q13683 1181 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 UBE2SQ16763 222 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 SMARCC2Q8TAQ2 1214 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 AFG1LQ8WV93 481 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 BADQ92934 168 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 INPP4AQ96PE3 977 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 TM6SF1Q9BZW5 370 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 UBE2OQ9C0C9 1292 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 PRKAG2Q9UGJ0 569 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 MRVI1Q9Y6F6 885 aa6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 V9GY48 417 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-204ENST00000558966 MROH7Q68CQ1 1323 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 DCDC2CA8MYV0 355 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 TMEM229AB2RXF0 380 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 MMP3P08254 477 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms