RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, human

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMA4-208	ENST00000558639	TMEM57	Q8N5G2	664 aa		9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	BEND7	Q8N7W2	519 aa	Predicted RBP	9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	TGFBRAP1	Q8WUH2	860 aa		9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	ELMO3	Q96BJ8	720 aa		9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	COA7	Q96BR5	231 aa		9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	OSBPL5	Q9H0X9	879 aa	Predicted RBP	9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	KCNK4	Q9NYG8	393 aa		9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	ZSWIM8	A7E2V4	1837 aa		9.1	□□□□□ -0.95
PSMA4-208	ENST00000558639	KIAA0100	Q14667	2235 aa	Known RBP	9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	LAMB1	P07942	1786 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	ZNF862	O60290	1169 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	SGPL1	O95470	568 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	CTSB	P07858	339 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	GJB1	P08034	283 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	CAP2	P40123	477 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	HMGCS2	P54868	508 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	ATP8B2	P98198	1209 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	TREML2	Q5T2D2	321 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	IGF2-AS	Q6U949	168 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	MAPKAPK5	Q8IW41	473 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	ZSCAN1	Q8NBB4	408 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	ZNF384	Q8TF68	577 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	DHX38	Q92620	1227 aa	Known RBP	9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	DBNDD2	Q9BQY9	259 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	HTATIP2	Q9BUP3	242 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	CCDC8	Q9H0W5	538 aa	Predicted RBP	9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	AS3MT	Q9HBK9	375 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	BRMS1	Q9HCU9	246 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	PI4KB	Q9UBF8	816 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	AGTPBP1	Q9UPW5	1226 aa		9.09	□□□□□ -0.95
PSMA4-208	ENST00000558639	PDS5A	Q29RF7	1337 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	ADGRA2	Q96PE1	1338 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	MAP4K4	O95819	1239 aa	Predicted RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	RRP1	P56182	461 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	PABPC4	Q13310	644 aa	Known RBP eCLIP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	RRP1B	Q14684	758 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	TNNI3K	Q59H18	835 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	WIPI1	Q5MNZ9	446 aa	Predicted RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	FBXW10	Q5XX13	1052 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	FOXP4	Q8IVH2	680 aa	Predicted RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	CCAR1	Q8IX12	1150 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	REXO1	Q8N1G1	1221 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	UBASH3B	Q8TF42	649 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	U2AF1L4	Q8WU68	220 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	DEFB118	Q96PH6	123 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	FERD3L	Q96RJ6	166 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	RUSC1	Q9BVN2	902 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	MRPL18	Q9H0U6	180 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	DHX36	Q9H2U1	1008 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	TMOD4	Q9NZQ9	345 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	SAP30BP	Q9UHR5	308 aa	Known RBP	9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	SLC45A1	Q9Y2W3	748 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	FPGT-TNNI3K	V9GXZ4	949 aa		9.08	□□□□□ -0.96
PSMA4-208	ENST00000558639	FAM229A	H3BQW9	127 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	FARP2	O94887	1054 aa	Predicted RBP	9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	DYNLL1	P63167	89 aa	Known RBP	9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	ACAD11	Q709F0	780 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	ITPRIP	Q8IWB1	547 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	SHISA4	Q96DD7	197 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	PLPPR2	Q96GM1	343 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	CRBN	Q96SW2	442 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	WDR18	Q9BV38	432 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	SRRT	Q9BXP5	876 aa	Known RBP	9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	CYP4F12	Q9HCS2	524 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	HERC5	Q9UII4	1024 aa	Known RBP	9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	PALD1	Q9ULE6	856 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	DDX19B	Q9UMR2	479 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	NR2E3	Q9Y5X4	410 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	ATRNL1	Q5VV63	1379 aa		9.07	□□□□□ -0.96
PSMA4-208	ENST00000558639	IDH1	O75874	414 aa	Known RBP	9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	GDF11	O95390	407 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	DLGAP3	O95886	979 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	IMPDH2	P12268	514 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	CYP2B6	P20813	491 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	CYP7A1	P22680	504 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	GCLC	P48506	637 aa	Predicted RBP	9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	FXR1	P51114	621 aa	Known RBP eCLIP	9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	IRX3	P78415	501 aa	Predicted RBP	9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	LRFN4	Q6PJG9	635 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	GK5	Q6ZS86	529 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	WDR89	Q96FK6	387 aa	Predicted RBP	9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	P2RX7	Q99572	595 aa	Known RBP	9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	ASCC2	Q9H1I8	757 aa	Predicted RBP	9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	CWC22	Q9HCG8	908 aa	Known RBP	9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	GPR108	Q9NPR9	543 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	PCDHB14	Q9Y5E9	798 aa		9.06	□□□□□ -0.96
PSMA4-208	ENST00000558639	SYNGAP1	Q96PV0	1343 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	TNRC18	O15417	2968 aa	Predicted RBP	9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	MEGF11	A6BM72	1044 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	DCDC2C	A8MYV0	355 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	PEX10	O60683	326 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	HLA-DOA	P06340	250 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	ASNS	P08243	561 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	BACE1	P56817	501 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	INSM1	Q01101	510 aa	Predicted RBP	9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	INPP5A	Q14642	412 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	FAM110C	Q1W6H9	321 aa		9.05	□□□□□ -0.96
PSMA4-208	ENST00000558639	ADGRA1	Q86SQ6	560 aa		9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms