RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 USP28Q96RU2 1077 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 GABBR1Q9UBS5 961 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 TNRC18O15417 2968 aaPredicted RBP19.64■□□□□ 0.73
TPM1-214ENST00000558544 ARVCFO00192 962 aa19.63■□□□□ 0.73
TPM1-214ENST00000558544 TECP42680 631 aa19.63■□□□□ 0.73
TPM1-214ENST00000558544 STAT5BP51692 787 aa19.63■□□□□ 0.73
TPM1-214ENST00000558544 SNX17Q15036 470 aa19.63■□□□□ 0.73
TPM1-214ENST00000558544 TMEM266Q2M3C6 531 aa19.63■□□□□ 0.73
TPM1-214ENST00000558544 ERAP1Q9NZ08 941 aa19.63■□□□□ 0.73
TPM1-214ENST00000558544 CEP131Q9UPN4 1083 aa19.63■□□□□ 0.73
TPM1-214ENST00000558544 IGSF9BQ9UPX0 1349 aa19.63■□□□□ 0.73
TPM1-214ENST00000558544 BMP15O95972 392 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 PRPHP41219 470 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 RTP1P59025 263 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 UGCGQ16739 394 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 TRIM60Q495X7 471 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 PDXDC2PQ6P474 469 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 PLPPR4Q7Z2D5 763 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 SLC43A3Q8NBI5 491 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 BANK1Q8NDB2 785 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 AFAP1L1Q8TED9 768 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 ZNF396Q96N95 335 aaPredicted RBP19.62■□□□□ 0.73
TPM1-214ENST00000558544 HTATIP2Q9BUP3 242 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 ATP11BQ9Y2G3 1177 aa19.62■□□□□ 0.73
TPM1-214ENST00000558544 PQBP1O60828 265 aaKnown RBP19.61■□□□□ 0.73
TPM1-214ENST00000558544 FXR2P51116 673 aaKnown RBP eCLIP19.61■□□□□ 0.73
TPM1-214ENST00000558544 NUCB2P80303 420 aa19.61■□□□□ 0.73
TPM1-214ENST00000558544 PTPAQ15257 358 aa19.61■□□□□ 0.73
TPM1-214ENST00000558544 EPHA7Q15375 998 aa19.61■□□□□ 0.73
TPM1-214ENST00000558544 IL17AQ16552 155 aa19.61■□□□□ 0.73
TPM1-214ENST00000558544 DTHD1Q6ZMT9 781 aa19.61■□□□□ 0.73
TPM1-214ENST00000558544 C7orf31Q8N865 590 aa19.61■□□□□ 0.73
TPM1-214ENST00000558544 RNPEPQ9H4A4 650 aa19.61■□□□□ 0.73
TPM1-214ENST00000558544 MAFBQ9Y5Q3 323 aaPredicted RBP19.61■□□□□ 0.73
TPM1-214ENST00000558544 SMIM10L2AP0DMW4 78 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 SMIM10L2BP0DMW5 78 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 RGS19P49795 217 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 CDK7P50613 346 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 PLCB4Q15147 1175 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 C1orf53Q5VUE5 145 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 NFRKBQ6P4R8 1299 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 TRMT1LQ7Z2T5 733 aaKnown RBP19.6■□□□□ 0.73
TPM1-214ENST00000558544 TFIP11Q9UBB9 837 aaKnown RBP19.6■□□□□ 0.73
TPM1-214ENST00000558544 HDAC6Q9UBN7 1215 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 TRPC6Q9Y210 931 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 EVPLQ92817 2033 aa19.6■□□□□ 0.73
TPM1-214ENST00000558544 MROH7Q68CQ1 1323 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 VWA3AA6NCI4 1184 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 ATP4AP20648 1035 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 SLC26A2P50443 739 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 CYP4A11Q02928 519 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 DNM1Q05193 864 aaKnown RBP19.59■□□□□ 0.73
TPM1-214ENST00000558544 ARL6IP4Q66PJ3 421 aaKnown RBP19.59■□□□□ 0.73
TPM1-214ENST00000558544 CKAP2LQ8IYA6 745 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 DYDC2Q96IM9 177 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 IPO9Q96P70 1041 aaKnown RBP19.59■□□□□ 0.73
TPM1-214ENST00000558544 EIF2AK1Q9BQI3 630 aaKnown RBP19.59■□□□□ 0.73
TPM1-214ENST00000558544 RGL1Q9NZL6 768 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 LOXHD1Q8IVV2 1947 aa19.59■□□□□ 0.73
TPM1-214ENST00000558544 ZNF862O60290 1169 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 P4HBP07237 508 aaKnown RBP19.58■□□□□ 0.73
TPM1-214ENST00000558544 MARCKSP29966 332 aaPredicted RBP19.58■□□□□ 0.73
TPM1-214ENST00000558544 NASPP49321 788 aaPredicted RBP19.58■□□□□ 0.73
TPM1-214ENST00000558544 PRKCEQ02156 737 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 TLE2Q04725 743 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 PTPN11Q06124 597 aaPredicted RBP19.58■□□□□ 0.73
TPM1-214ENST00000558544 STK38Q15208 465 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 GDF6Q6KF10 455 aaPredicted RBP19.58■□□□□ 0.73
TPM1-214ENST00000558544 SESTD1Q86VW0 696 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 FAM126BQ8IXS8 530 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 IGSF22Q8N9C0 903 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 ATP6V0A1Q93050 837 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 CHAMP1Q96JM3 812 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 LXNQ9BS40 222 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 SEZ6LQ9BYH1 1024 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 RAB34Q9BZG1 259 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 TRMT13Q9NUP7 481 aaKnown RBP19.58■□□□□ 0.73
TPM1-214ENST00000558544 LRWD1Q9UFC0 647 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 GTF2IRD1Q9UHL9 959 aa19.58■□□□□ 0.73
TPM1-214ENST00000558544 POTEB3A0JP26 581 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 PP2D1A8MPX8 630 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 B4GALT4O60513 344 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 QARSP47897 775 aaKnown RBP19.57■□□□□ 0.72
TPM1-214ENST00000558544 PSMC5P62195 406 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 PPFIA1Q13136 1202 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 CTTNQ14247 550 aaKnown RBP19.57■□□□□ 0.72
TPM1-214ENST00000558544 HIC1Q14526 733 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 POTEBQ6S5H4 581 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 ANKRD33Q7Z3H0 272 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 ATP8B4Q8TF62 1192 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 TRPV6Q9H1D0 765 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 SETD4Q9NVD3 440 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 WRAP73Q9P2S5 460 aaPredicted RBP19.57■□□□□ 0.72
TPM1-214ENST00000558544 C17orf102A2RUQ5 167 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 OATP04181 439 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 INSRRP14616 1297 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 IGBP1P78318 339 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 GRIN1Q05586 938 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 PDIA5Q14554 519 aa19.57■□□□□ 0.72
TPM1-214ENST00000558544 SLC39A14Q15043 492 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms