RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 EPOPA6NHQ4 379 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 MEIS1O00470 390 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 EPB41L2O43491 1005 aaKnown RBP13.57□□□□□ -0.24
HERC1-202ENST00000558324 EFCAB14O75071 495 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 CAND2O75155 1236 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 IFNAR1P17181 557 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 GNA11P29992 359 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 PLEKHG4Q58EX7 1191 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 CCDC148Q8NFR7 591 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 TRAPPC12Q8WVT3 735 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 DNAJB3Q8WWF6 145 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 SEPT8Q92599 483 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 COL25A1Q9BXS0 654 aaPredicted RBP13.57□□□□□ -0.24
HERC1-202ENST00000558324 FAM49AQ9H0Q0 323 aaPredicted RBP13.57□□□□□ -0.24
HERC1-202ENST00000558324 MTUS1Q9ULD2 1270 aa13.57□□□□□ -0.24
HERC1-202ENST00000558324 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 CPLX1O14810 134 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 BACH1O14867 736 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 GJB5O95377 273 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 CCNE2O96020 404 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 AMHP03971 560 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 GHRP10912 638 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 INSRRP14616 1297 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 STAT5BP51692 787 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 EVCP57679 992 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 SSRP1Q08945 709 aaKnown RBP13.56□□□□□ -0.24
HERC1-202ENST00000558324 PRR16Q569H4 304 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 MARCH8Q5T0T0 291 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 TAF2Q6P1X5 1199 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 NIPA1Q7RTP0 329 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 TRIM22Q8IYM9 498 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 CRYGNQ8WXF5 182 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 PDRG1Q9NUG6 133 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 CHD9Q3L8U1 2897 aa13.56□□□□□ -0.24
HERC1-202ENST00000558324 IPO5O00410 1097 aaKnown RBP13.55□□□□□ -0.24
HERC1-202ENST00000558324 CHRNA1P02708 482 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 CYP3A4P08684 503 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 NLRP5P59047 1200 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 TMEM62Q0P6H9 643 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 PLCB4Q15147 1175 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 KRT40Q6A162 431 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 RSPH3Q86UC2 560 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 BICD2Q8TD16 824 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 RAD9AQ99638 391 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 ZNF577Q9BSK1 485 aa13.55□□□□□ -0.24
HERC1-202ENST00000558324 IFIH1Q9BYX4 1025 aaKnown RBP13.55□□□□□ -0.24
HERC1-202ENST00000558324 POTEB3A0JP26 581 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 MBLAC1A4D2B0 266 aaPredicted RBP13.54□□□□□ -0.24
HERC1-202ENST00000558324 RRN3P2A6NIE6 340 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 GTPBP6O43824 516 aaPredicted RBP13.54□□□□□ -0.24
HERC1-202ENST00000558324 DTNBO60941 627 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 UPP2O95045 317 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
HERC1-202ENST00000558324 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
HERC1-202ENST00000558324 FAM26DQ5JW98 314 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 FAM160B1Q5W0V3 765 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 POTEBQ6S5H4 581 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 PLPPR4Q7Z2D5 763 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 TRMT1LQ7Z2T5 733 aaKnown RBP13.54□□□□□ -0.24
HERC1-202ENST00000558324 CCDC60Q8IWA6 550 aaPredicted RBP13.54□□□□□ -0.24
HERC1-202ENST00000558324 GDPD5Q8WTR4 605 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 ZNF274Q96GC6 653 aaPredicted RBP13.54□□□□□ -0.24
HERC1-202ENST00000558324 AIFM3Q96NN9 605 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 CDY2AQ9Y6F7 541 aa13.54□□□□□ -0.24
HERC1-202ENST00000558324 COL4A4P53420 1690 aaPredicted RBP13.53□□□□□ -0.24
HERC1-202ENST00000558324 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.53□□□□□ -0.24
HERC1-202ENST00000558324 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 DHX15O43143 795 aaKnown RBP13.53□□□□□ -0.24
HERC1-202ENST00000558324 MRPS6P82932 125 aaKnown RBP13.53□□□□□ -0.24
HERC1-202ENST00000558324 MGAT3Q09327 533 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 GRB10Q13322 594 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 LPIN1Q14693 890 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 SKIV2LQ15477 1246 aaKnown RBP13.53□□□□□ -0.24
HERC1-202ENST00000558324 ERICH6BQ5W0A0 696 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 SWSAP1Q6NVH7 229 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 MIS18BP1Q6P0N0 1132 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 PDXDC2PQ6P474 469 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 CPLX2Q6PUV4 134 aaKnown RBP13.53□□□□□ -0.24
HERC1-202ENST00000558324 ABHD15Q6UXT9 468 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 CKAP2LQ8IYA6 745 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 MTCH2Q9Y6C9 303 aa13.53□□□□□ -0.24
HERC1-202ENST00000558324 CHD7Q9P2D1 2997 aa13.52□□□□□ -0.24
HERC1-202ENST00000558324 PRUNE2Q8WUY3 3088 aa13.52□□□□□ -0.24
HERC1-202ENST00000558324 IGKV6D-21A0A0A0MT36 114 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 M0QZ92 97 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 ATG7O95352 703 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 DEXIO95424 95 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 FBXO47Q5MNV8 452 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 RPAINQ86UA6 219 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 APBB2Q92870 758 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 TNPO1Q92973 898 aaKnown RBP13.52□□□□□ -0.25
HERC1-202ENST00000558324 YME1L1Q96TA2 773 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 SH3GLB2Q9NR46 395 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 TBC1D22BQ9NU19 505 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms