RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 DDX1Q92499 740 aaKnown RBP4.97□□□□□ -1.61
SPG11-206ENST00000558093 TEPSINQ96N21 525 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 TMEM168Q9H0V1 697 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 SLC39A2Q9NP94 309 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 RTEL1Q9NZ71 1219 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 SAMD15Q9P1V8 674 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 MRPL42Q9Y6G3 142 aaKnown RBP4.97□□□□□ -1.61
SPG11-206ENST00000558093 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 MROH6A6NGR9 719 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 FAM90A27PA6NNH2 459 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 M0R2C6 588 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 CDC45O75419 566 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 ASLP04424 464 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 CNR2P34972 360 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 LACTBP83111 547 aaPredicted RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 IRF9Q00978 393 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 KIAA2012Q0VF49 1180 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 DBPQ10586 325 aaPredicted RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 PABPC4Q13310 644 aaKnown RBP eCLIP4.96□□□□□ -1.62
SPG11-206ENST00000558093 SMAD2Q15796 467 aaKnown RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 ZCCHC8Q6NZY4 707 aaKnown RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 HHIPL2Q6UWX4 724 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 TXNDC5Q8NBS9 432 aaKnown RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 WDR48Q8TAF3 677 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 IGDCC4Q8TDY8 1250 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 ZCCHC14Q8WYQ9 949 aaKnown RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 LCORQ96JN0 433 aaPredicted RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 CLUHP3Q96NS8 147 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 PDGFDQ9GZP0 370 aaPredicted RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 CABP5Q9NP86 173 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 WASF3Q9UPY6 502 aa4.96□□□□□ -1.62
SPG11-206ENST00000558093 TNPO3Q9Y5L0 923 aaKnown RBP4.96□□□□□ -1.62
SPG11-206ENST00000558093 NOBOXO60393 691 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 DNAJC8O75937 253 aaPredicted RBP4.95□□□□□ -1.62
SPG11-206ENST00000558093 GLRX3O76003 335 aaKnown RBP4.95□□□□□ -1.62
SPG11-206ENST00000558093 MLLT6P55198 1093 aaPredicted RBP4.95□□□□□ -1.62
SPG11-206ENST00000558093 ZNF460Q14592 562 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 RTP5Q14D33 572 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 PIK3R6Q5UE93 754 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 PKN3Q6P5Z2 889 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 ABHD17CQ6PCB6 329 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 C16orf86Q6ZW13 317 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 UBE2R2Q712K3 238 aaPredicted RBP4.95□□□□□ -1.62
SPG11-206ENST00000558093 OVCH1Q7RTY7 1134 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 JAZF1Q86VZ6 243 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 NOSTRINQ8IVI9 506 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 LGI4Q8N135 537 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 STPG3Q8N7X2 389 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 HIPK4Q8NE63 616 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 TACO1Q9BSH4 297 aaKnown RBP4.95□□□□□ -1.62
SPG11-206ENST00000558093 BOCQ9BWV1 1114 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 BARX1Q9HBU1 254 aaPredicted RBP4.95□□□□□ -1.62
SPG11-206ENST00000558093 KCNH7Q9NS40 1196 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 MAGEC2Q9UBF1 373 aaPredicted RBP4.95□□□□□ -1.62
SPG11-206ENST00000558093 CD2APQ9Y5K6 639 aa4.95□□□□□ -1.62
SPG11-206ENST00000558093 C9orf118A6NHY6 69 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 C4BPAP04003 597 aaKnown RBP4.94□□□□□ -1.62
SPG11-206ENST00000558093 MMEP08473 750 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 JMJD7P0C870 316 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 PTGS1P23219 599 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 HERVK_113P62684 666 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 TMEM132BQ14DG7 1078 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 ARHGAP44Q17R89 818 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 C21orf62-AS1Q17RA5 79 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 PLEKHH3Q7Z736 793 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 FERMT3Q86UX7 667 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 CHST14Q8NCH0 376 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 RELTQ969Z4 430 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 C20orf173Q96LM9 149 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 YTHDC1Q96MU7 727 aaKnown RBP4.94□□□□□ -1.62
SPG11-206ENST00000558093 BDH2Q9BUT1 245 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 PCIF1Q9H4Z3 704 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 INCENPQ9NQS7 918 aa4.94□□□□□ -1.62
SPG11-206ENST00000558093 H0Y858 1186 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 FOXP2O15409 715 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 RFPL3O75679 317 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 CHGBP05060 677 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 SYN1P17600 705 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 AOAHP28039 575 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 MC4RP32245 332 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 WDR72Q3MJ13 1102 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 CFAP100Q494V2 611 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 TAF7LQ5H9L4 462 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 FSTL4Q6MZW2 842 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 DPP8Q6V1X1 898 aaPredicted RBP4.93□□□□□ -1.62
SPG11-206ENST00000558093 NOP9Q86U38 636 aaKnown RBP4.93□□□□□ -1.62
SPG11-206ENST00000558093 ERCC4Q92889 916 aaPredicted RBP4.93□□□□□ -1.62
SPG11-206ENST00000558093 WNK4Q96J92 1243 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 FEZ1Q99689 392 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 KCND1Q9NSA2 647 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 INTS7Q9NVH2 962 aaKnown RBP4.93□□□□□ -1.62
SPG11-206ENST00000558093 ZDHHC9Q9Y397 364 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 ZNF536O15090 1300 aa4.93□□□□□ -1.62
SPG11-206ENST00000558093 PTPDC1A2A3K4 754 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 H7C1D1 291 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 KPNA6O60684 536 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 KNG1P01042 644 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 KCNA6P17658 529 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 SDSP20132 328 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 NEK4P51957 841 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms