RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MTNR1BP49286 362 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 USP11P51784 963 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 SLC5A3P53794 718 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 JAM2P57087 298 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 RPL11P62913 178 aaKnown RBP4.59□□□□□ -1.67
TDP1-217ENST00000557782 RAC1P63000 192 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 SPIRE1Q08AE8 756 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 FSCN1Q16658 493 aaKnown RBP4.59□□□□□ -1.67
TDP1-217ENST00000557782 PGS1Q32NB8 556 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 DGKKQ5KSL6 1271 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 TRAPPC3LQ5T215 181 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 SFRP5Q5T4F7 317 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 RNF220Q5VTB9 566 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 MZT2AQ6P582 158 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 OSTM1Q86WC4 334 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 FBXO11Q86XK2 927 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 KIAA0319LQ8IZA0 1049 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 KRT78Q8N1N4 520 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 OR2C3Q8N628 320 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 ZNF655Q8N720 491 aaPredicted RBP4.59□□□□□ -1.67
TDP1-217ENST00000557782 CCDC89Q8N998 374 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 GCC1Q96CN9 775 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 APOL5Q9BWW9 433 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 SLC12A9Q9BXP2 914 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 HDAC8Q9BY41 377 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 QRSL1Q9H0R6 528 aaKnown RBP4.59□□□□□ -1.67
TDP1-217ENST00000557782 MYLK2Q9H1R3 596 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 VPS11Q9H270 941 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 MS4A5Q9H3V2 200 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 SMOC1Q9H4F8 434 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 ACSS3Q9H6R3 686 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 ZMAT4Q9H898 229 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 SMURF1Q9HCE7 757 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 AGO4Q9HCK5 861 aaKnown RBP4.59□□□□□ -1.67
TDP1-217ENST00000557782 CLDND1Q9NY35 253 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.59□□□□□ -1.67
TDP1-217ENST00000557782 PCDHGB3Q9Y5G1 929 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 TIMM13Q9Y5L4 95 aaPredicted RBP4.59□□□□□ -1.67
TDP1-217ENST00000557782 CAPN8A6NHC0 703 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 SHISA8B8ZZ34 492 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 NRG2O14511 850 aaPredicted RBP4.58□□□□□ -1.68
TDP1-217ENST00000557782 DVL2O14641 736 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 SART1O43290 800 aaKnown RBP4.58□□□□□ -1.68
TDP1-217ENST00000557782 GAS2O43903 313 aaKnown RBP4.58□□□□□ -1.68
TDP1-217ENST00000557782 RNASEH2AO75792 299 aaKnown RBP4.58□□□□□ -1.68
TDP1-217ENST00000557782 GSTM1P09488 218 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 VAV1P15498 845 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 ENDOUP21128 410 aaKnown RBP4.58□□□□□ -1.68
TDP1-217ENST00000557782 RASSF7Q02833 373 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 UGT8Q16880 541 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 INF2Q27J81 1249 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 ANO6Q4KMQ2 910 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 TLDC1Q6P9B6 456 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 LVRNQ6Q4G3 990 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 IGF2-ASQ6U949 168 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 NPNTQ6UXI9 565 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 ARHGAP36Q6ZRI8 547 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 ILDR2Q71H61 639 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 MAATS1Q7Z4T9 603 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 DRC7Q8IY82 874 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 THEMISQ8N1K5 641 aaPredicted RBP4.58□□□□□ -1.68
TDP1-217ENST00000557782 TOP6BLQ8N6T0 577 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 GIMAP7Q8NHV1 300 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 EDARADDQ8WWZ3 215 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 LRTOMTQ8WZ04 291 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 NEUROD6Q96NK8 337 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 MRPL18Q9H0U6 180 aaKnown RBP4.58□□□□□ -1.68
TDP1-217ENST00000557782 BHMT2Q9H2M3 363 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 PRDM5Q9NQX1 630 aaPredicted RBP4.58□□□□□ -1.68
TDP1-217ENST00000557782 SAGE1Q9NXZ1 904 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 MSRAQ9UJ68 235 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 L1RE1Q9UN81 338 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 RABGAP1Q9Y3P9 1069 aa4.58□□□□□ -1.68
TDP1-217ENST00000557782 SSU72P8A0A1W2PR75 194 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 DYTNA2CJ06 578 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 LRRC10BA6NIK2 292 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 RHPN2P1A8MT19 583 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 H7BY64 318 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 CCER2I3L3R5 266 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 SCDO00767 359 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 ZNF205O95201 554 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 TBC1D8O95759 1140 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 CBX7O95931 251 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 AGR2O95994 175 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 PPM1AP35813 382 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 IL12RB1P42701 662 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 PRIM2P49643 509 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 MRPS9P82933 396 aaKnown RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 ALDH6A1Q02252 535 aaKnown RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 ICA1Q05084 483 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 LAPTM5Q13571 262 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 POLD3Q15054 466 aaPredicted RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 CNN3Q15417 329 aaKnown RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.57□□□□□ -1.68
TDP1-217ENST00000557782 TUBB8Q3ZCM7 444 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 FIGNQ5HY92 759 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 ANGEL2Q5VTE6 544 aaKnown RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 CC2D1AQ6P1N0 951 aaPredicted RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 RSRC2Q7L4I2 434 aaKnown RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms