RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 ZSCAN29Q8IWY8 852 aaPredicted RBP11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 MMGT1Q8N4V1 131 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 FBF1Q8TES7 1133 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 TRIM9Q9C026 710 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 AZI2Q9H6S1 392 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 SWAP70Q9UH65 585 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 MYH3P11055 1940 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 FAM205AQ6ZU69 1335 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 A0A1W2PQC6 194 aa11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 PGRMC1O00264 195 aaKnown RBP11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 ZNF263O14978 683 aa11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 GNA11P29992 359 aa11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 TM4SF1P30408 202 aa11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 SLC8A1P32418 973 aa11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 ADGRA1Q86SQ6 560 aa11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 LRRC47Q8N1G4 583 aaKnown RBP11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 WHAMMQ8TF30 809 aa11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 CPSF2Q9P2I0 782 aaKnown RBP11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 TSKSQ9UJT2 592 aa11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 COL11A2P13942 1736 aaPredicted RBP11.9□□□□□ -0.51
CCDC85C-207ENST00000557769 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 NPHP3-ACAD11A0A0J9YXS1 232 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 FAM107AO95990 144 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 H2AFZP0C0S5 128 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 PRDX5P30044 214 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 DIXDC1Q155Q3 683 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 ALKBH5Q6P6C2 394 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 H2AFVQ71UI9 128 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 NEK8Q86SG6 692 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 SYCP3Q8IZU3 236 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 GLIS3Q8NEA6 775 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 STAMBPL1Q96FJ0 436 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 TLR10Q9BXR5 811 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 ASIC3Q9UHC3 531 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 KIAA1024Q9UPX6 916 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 A0A087X0T9 212 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 SFI1A8K8P3 1242 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 FAM228BP0C875 321 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 ITGA4P13612 1032 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 GNAQP50148 359 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 IL17AQ16552 155 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 UBE2SQ16763 222 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 TBC1D9BQ66K14 1250 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 NUGGCQ68CJ6 796 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 NSMCE1Q8WV22 266 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 DDX12PQ92771 950 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 STK32BQ9NY57 414 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 PKD2L1Q9P0L9 805 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 AMFRQ9UKV5 643 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 WDR19Q8NEZ3 1342 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 ATP11AP98196 1134 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 INTS8Q75QN2 995 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 HOOK3Q86VS8 718 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 CCDC50Q8IVM0 306 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 RAPGEF5Q92565 580 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 ABCC12Q96J65 1359 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 PIGSQ96S52 555 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 FMO2Q99518 471 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 DDX20Q9UHI6 824 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 SALL4Q9UJQ4 1053 aa11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 DBR1Q9UK59 544 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-207ENST00000557769 SPOPO43791 374 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 NR2F2P24468 414 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 QPCTQ16769 361 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 ZNF449Q6P9G9 518 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 LMBR1Q8WVP7 490 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 GPR101Q96P66 508 aaPredicted RBP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 MTRF1LQ9UGC7 380 aaKnown RBP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 TBCAO75347 108 aaKnown RBP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 TNFAIP3P21580 790 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 CCDC65Q8IXS2 484 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 GLG1Q92896 1179 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 DUSP9Q99956 384 aaKnown RBP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 TAOK3Q9H2K8 898 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 FAM237AA0A1B0GTK4 181 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 FLOT1O75955 427 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 FGFR4P22455 802 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 CYP2J2P51589 502 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 TRIM28Q13263 835 aaKnown RBP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 PABPC4Q13310 644 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 PFKFB3Q16875 520 aaPredicted RBP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 PSMD1Q99460 953 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 PRMT1Q99873 361 aaKnown RBP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 TMOD4Q9NZQ9 345 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 NOC2LQ9Y3T9 749 aaKnown RBP11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 DAAM1Q9Y4D1 1078 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 COL4A3BPQ9Y5P4 624 aa11.88□□□□□ -0.51
CCDC85C-207ENST00000557769 GCNT3O95395 438 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms