RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 RDM1Q8NG50 284 aa12.77□□□□□ -0.37
APEX1-220ENST00000557592 USP28Q96RU2 1077 aa12.77□□□□□ -0.37
APEX1-220ENST00000557592 ERAP1Q9NZ08 941 aa12.77□□□□□ -0.37
APEX1-220ENST00000557592 TFIP11Q9UBB9 837 aaKnown RBP12.77□□□□□ -0.37
APEX1-220ENST00000557592 GABBR1Q9UBS5 961 aa12.77□□□□□ -0.37
APEX1-220ENST00000557592 KAT6AQ92794 2004 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 ARVCFO00192 962 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 HAS3O00219 553 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■□□□□ 8.7
APEX1-220ENST00000557592 LRRC26Q2I0M4 334 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 TRIM60Q495X7 471 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 PDXDC2PQ6P474 469 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 DTHD1Q6ZMT9 781 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 PLPPR4Q7Z2D5 763 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 C7orf31Q8N865 590 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 BANK1Q8NDB2 785 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 AFAP1L1Q8TED9 768 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
APEX1-220ENST00000557592 HTATIP2Q9BUP3 242 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 RNPEPQ9H4A4 650 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 ATP11BQ9Y2G3 1177 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 GRIN2DO15399 1336 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 ALPK3Q96L96 1907 aa12.76□□□□□ -0.37
APEX1-220ENST00000557592 VWA3AA6NCI4 1184 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 PQBP1O60828 265 aaKnown RBP12.75□□□□□ -0.37
APEX1-220ENST00000557592 SMIM10L2AP0DMW4 78 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 SMIM10L2BP0DMW5 78 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 NCLP19338 710 aaKnown RBP12.75□□□□□ -0.37
APEX1-220ENST00000557592 SLC26A2P50443 739 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 RTP1P59025 263 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 CYP4A11Q02928 519 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 SNX17Q15036 470 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 STK38Q15208 465 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 PTPAQ15257 358 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 EPHA7Q15375 998 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 IL17AQ16552 155 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 UGCGQ16739 394 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 ARL6IP4Q66PJ3 421 aaKnown RBP12.75□□□□□ -0.37
APEX1-220ENST00000557592 NFRKBQ6P4R8 1299 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 TRMT1LQ7Z2T5 733 aaKnown RBP12.75□□□□□ -0.37
APEX1-220ENST00000557592 SLC43A3Q8NBI5 491 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 ERMNQ8TAM6 284 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 ATP6V0A1Q93050 837 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 DYDC2Q96IM9 177 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 EIF2AK1Q9BQI3 630 aaKnown RBP12.75□□□□□ -0.37
APEX1-220ENST00000557592 RAB34Q9BZG1 259 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 LRWD1Q9UFC0 647 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 IGSF9BQ9UPX0 1349 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 ATP6V1DQ9Y5K8 247 aa12.75□□□□□ -0.37
APEX1-220ENST00000557592 MAFBQ9Y5Q3 323 aaPredicted RBP12.75□□□□□ -0.37
APEX1-220ENST00000557592 MROH7Q68CQ1 1323 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 MARCKSP29966 332 aaPredicted RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 QARSP47897 775 aaKnown RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 NASPP49321 788 aaPredicted RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 CDK7P50613 346 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 PSMC5P62195 406 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 PRKCEQ02156 737 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 DNM1Q05193 864 aaKnown RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 PTPN11Q06124 597 aaPredicted RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 PDIA5Q14554 519 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 SLC39A14Q15043 492 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 PLCB4Q15147 1175 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 ATL3Q6DD88 541 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 TPH2Q8IWU9 490 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 IGSF22Q8N9C0 903 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 SEZ6LQ9BYH1 1024 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 RGL1Q9NZL6 768 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 HDAC6Q9UBN7 1215 aa12.74□□□□□ -0.37
APEX1-220ENST00000557592 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 TNRC18O15417 2968 aaPredicted RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 TRIP12Q14669 1992 aaPredicted RBP12.74□□□□□ -0.37
APEX1-220ENST00000557592 TCHHQ07283 1943 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 C17orf102A2RUQ5 167 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 DCDC2CA8MYV0 355 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 TLR3O15455 904 aaKnown RBP12.73□□□□□ -0.37
APEX1-220ENST00000557592 ZNF862O60290 1169 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 YEATS4O95619 227 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 OATP04181 439 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 P4HBP07237 508 aaKnown RBP12.73□□□□□ -0.37
APEX1-220ENST00000557592 ATP4AP20648 1035 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 TLE2Q04725 743 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 PPFIA1Q13136 1202 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 SESTD1Q86VW0 696 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 LINC00301Q8NCQ3 95 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 NEK9Q8TD19 979 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 ATP8B4Q8TF62 1192 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 DPF3Q92784 378 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 CHAMP1Q96JM3 812 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 FAM167AQ96KS9 214 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 LXNQ9BS40 222 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 TRPV6Q9H1D0 765 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 TRMT13Q9NUP7 481 aaKnown RBP12.73□□□□□ -0.37
APEX1-220ENST00000557592 SETD4Q9NVD3 440 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 CHMP5Q9NZZ3 219 aa12.73□□□□□ -0.37
APEX1-220ENST00000557592 GTF2IRD1Q9UHL9 959 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms