RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 LENG9Q96B70 501 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 HDAC9Q9UKV0 1011 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 AFF2P51816 1311 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 ANKRD31Q8N7Z5 1873 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 F5H6K3 240 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 ZBTB39O15060 712 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 PAFAH1B1P43034 410 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 KLRC3Q07444 240 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 CCDC70Q6NSX1 233 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 C10orf67Q8IYJ2 551 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 CEP63Q96MT8 703 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 STIM2Q9P246 746 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 RSPH14Q9UHP6 348 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 FAM153BP0C7A2 387 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 PRLRP16471 622 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 CARSP49589 748 aaKnown RBP19.48■□□□□ 0.71
XRCC3-218ENST00000557439 ICA1Q05084 483 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 PTK2Q05397 1052 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 FAM153CQ494X1 144 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 TCERG1LQ5VWI1 586 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 MSL1Q68DK7 614 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 GOLGA6L1Q8N7Z2 621 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 FAM153AQ9UHL3 310 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 SRCAPQ6ZRS2 3230 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 SIPA1L1O43166 1804 aa19.48■□□□□ 0.71
XRCC3-218ENST00000557439 RBAK-RBAKDNI3L0D1 243 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 UBXN2AP68543 259 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 ASIC2Q16515 512 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 SLC18A3Q16572 532 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
XRCC3-218ENST00000557439 ZNF572Q7Z3I7 529 aaPredicted RBP19.47■□□□□ 0.71
XRCC3-218ENST00000557439 KSR1Q8IVT5 923 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 IFT81Q8WYA0 676 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 RUSC1Q9BVN2 902 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 BHMT2Q9H2M3 363 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 LRRC37AA6NMS7 1700 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 GREB1LQ9C091 1923 aaPredicted RBP19.47■□□□□ 0.71
XRCC3-218ENST00000557439 EML1O00423 815 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 CETN3O15182 167 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 AKAP3O75969 853 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 USP11P51784 963 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 HHIPL2Q6UWX4 724 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 ZNF571Q7Z3V5 609 aaPredicted RBP19.47■□□□□ 0.71
XRCC3-218ENST00000557439 PIGOQ8TEQ8 1089 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 ZNF622Q969S3 477 aaKnown RBP eCLIP19.47■□□□□ 0.71
XRCC3-218ENST00000557439 NFU1Q9UMS0 254 aa19.47■□□□□ 0.71
XRCC3-218ENST00000557439 PPARDQ03181 441 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 RRP1BQ14684 758 aaKnown RBP19.46■□□□□ 0.71
XRCC3-218ENST00000557439 NAB2Q15742 525 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 ARL8AQ96BM9 186 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 KRT12Q99456 494 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 EDEM3Q9BZQ6 932 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 GRID2IPA4D2P6 1211 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 MYO1CO00159 1063 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 OPLAHO14841 1288 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 NDUFB10O96000 172 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 GUCY2DQ02846 1103 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 RBM46Q8TBY0 533 aaKnown RBP19.46■□□□□ 0.71
XRCC3-218ENST00000557439 CRYGNQ8WXF5 182 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 SUGT1Q9Y2Z0 365 aa19.46■□□□□ 0.71
XRCC3-218ENST00000557439 RRP15Q9Y3B9 282 aaKnown RBP19.46■□□□□ 0.71
XRCC3-218ENST00000557439 FRMD3A2A2Y4 597 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 GOLGA6CA6NDK9 693 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 MSH4O15457 936 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 CHMP2AO43633 222 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 GOLGA6DP0CG33 693 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 GUCY2FP51841 1108 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 DPY19L2P1Q6NXN4 242 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 EPB41L5Q9HCM4 733 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 GOLGA6AQ9NYA3 693 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 FEZ2Q9UHY8 353 aaPredicted RBP19.45■□□□□ 0.7
XRCC3-218ENST00000557439 CYP3A7-CYP3A51PA0A087WV96 503 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 CYP3A7P24462 503 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 CTTNQ14247 550 aaKnown RBP19.45■□□□□ 0.7
XRCC3-218ENST00000557439 CFAP221Q4G0U5 840 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 SRLQ86TD4 932 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 CCDC17Q96LX7 622 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 SPAG5Q96R06 1193 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 TDRD3Q9H7E2 651 aaKnown RBP19.45■□□□□ 0.7
XRCC3-218ENST00000557439 ARMCX3Q9UH62 379 aaPredicted RBP19.45■□□□□ 0.7
XRCC3-218ENST00000557439 DNM3Q9UQ16 869 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 PCDHB13Q9Y5F0 798 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 MYO3BQ8WXR4 1341 aa19.45■□□□□ 0.7
XRCC3-218ENST00000557439 SPDYE3A6NKU9 549 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 HEXIM1O94992 359 aaKnown RBP19.44■□□□□ 0.7
XRCC3-218ENST00000557439 MARSP56192 900 aaKnown RBP19.44■□□□□ 0.7
XRCC3-218ENST00000557439 KNOP1Q1ED39 458 aaKnown RBP19.44■□□□□ 0.7
XRCC3-218ENST00000557439 KCTD16Q68DU8 428 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 IRF2BP2Q7Z5L9 587 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 FBXO11Q86XK2 927 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 KLHL7Q8IXQ5 586 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 SH2D3CQ8N5H7 860 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 RNF10Q8N5U6 811 aaKnown RBP19.44■□□□□ 0.7
XRCC3-218ENST00000557439 AMNQ9BXJ7 453 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 CWC15Q9P013 229 aaKnown RBP19.44■□□□□ 0.7
XRCC3-218ENST00000557439 A0A1W2PRG0 241 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 GCNT3O95395 438 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 GNA14O95837 355 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 GH2P01242 217 aa19.44■□□□□ 0.7
XRCC3-218ENST00000557439 UCHL3P15374 230 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms