RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 AAK1Q2M2I8 961 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 KRT40Q6A162 431 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 BLOC1S2Q6QNY1 142 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 Q6ZUG5 572 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 RPAINQ86UA6 219 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 RSPH3Q86UC2 560 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 KCNB2Q92953 911 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 AZI2Q9H6S1 392 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 FAM217BQ9NTX9 383 aaPredicted RBP16.18■□□□□ 0.18
SNX6-210ENST00000557341 MBLAC1A4D2B0 266 aaPredicted RBP16.17■□□□□ 0.18
SNX6-210ENST00000557341 LPXNO60711 386 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 REC8O95072 547 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 SCG2P13521 617 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 CPA1P15085 419 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 HTRA4P83105 476 aaPredicted RBP16.17■□□□□ 0.18
SNX6-210ENST00000557341 APOBRQ0VD83 1088 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 PFKFB3Q16875 520 aaPredicted RBP16.17■□□□□ 0.18
SNX6-210ENST00000557341 CEP55Q53EZ4 464 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 RUFY4Q6ZNE9 571 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 CYP2W1Q8TAV3 490 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 ADAMTS19Q8TE59 1207 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 TNPO1Q92973 898 aaKnown RBP16.17■□□□□ 0.18
SNX6-210ENST00000557341 BRF1Q92994 677 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 TMEM260Q9NX78 707 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 SNX14Q9Y5W7 946 aa16.17■□□□□ 0.18
SNX6-210ENST00000557341 TNFRSF10AO00220 468 aa16.16■□□□□ 0.18
SNX6-210ENST00000557341 RPLP2P05387 115 aaKnown RBP16.16■□□□□ 0.18
SNX6-210ENST00000557341 ADD1P35611 737 aaKnown RBP16.16■□□□□ 0.18
SNX6-210ENST00000557341 ACTR2P61160 394 aa16.16■□□□□ 0.18
SNX6-210ENST00000557341 MGAT3Q09327 533 aa16.16■□□□□ 0.18
SNX6-210ENST00000557341 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
SNX6-210ENST00000557341 CCDC12Q8WUD4 166 aaPredicted RBP16.16■□□□□ 0.18
SNX6-210ENST00000557341 YME1L1Q96TA2 773 aa16.16■□□□□ 0.18
SNX6-210ENST00000557341 OSBPL7Q9BZF2 842 aa16.16■□□□□ 0.18
SNX6-210ENST00000557341 SUGCTQ9HAC7 445 aa16.16■□□□□ 0.18
SNX6-210ENST00000557341 AGO4Q9HCK5 861 aaKnown RBP16.16■□□□□ 0.18
SNX6-210ENST00000557341 LMCD1Q9NZU5 365 aa16.16■□□□□ 0.18
SNX6-210ENST00000557341 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
SNX6-210ENST00000557341 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.15■□□□□ 0.18
SNX6-210ENST00000557341 ESYT2A0FGR8 921 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 RRN3P2A6NIE6 340 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 CHRNA1P02708 482 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 ARP10275 920 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 GHRP10912 638 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 ZNF76P36508 570 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 IGBP1P78318 339 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 TFF2Q03403 129 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 ITGB3BPQ13352 177 aaPredicted RBP16.15■□□□□ 0.18
SNX6-210ENST00000557341 MARCH8Q5T0T0 291 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 NIPA1Q7RTP0 329 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 FBXL16Q8N461 479 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 TOP1MTQ969P6 601 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 UHRF1Q96T88 793 aaPredicted RBP16.15■□□□□ 0.18
SNX6-210ENST00000557341 PCYT2Q99447 389 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 COG5Q9UP83 839 aa16.15■□□□□ 0.18
SNX6-210ENST00000557341 FNDC1Q4ZHG4 1894 aaPredicted RBP16.14■□□□□ 0.17
SNX6-210ENST00000557341 MEIS1O00470 390 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 UPP2O95045 317 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 INSRRP14616 1297 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 PSMA5P28066 241 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 JAKMIP3Q5VZ66 844 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 MCTP2Q6DN12 878 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 PLPPR4Q7Z2D5 763 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 REXO1Q8N1G1 1221 aaKnown RBP16.14■□□□□ 0.17
SNX6-210ENST00000557341 FBXO22Q8NEZ5 403 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 DNAJB3Q8WWF6 145 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 SAMD11Q96NU1 681 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 C17orf80Q9BSJ5 609 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 AGXT2Q9BYV1 514 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 ZMYND12Q9H0C1 365 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 C6orf50Q9HD87 102 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 CDY2AQ9Y6F7 541 aa16.14■□□□□ 0.17
SNX6-210ENST00000557341 SLC26A2P50443 739 aa16.13■□□□□ 0.17
SNX6-210ENST00000557341 STAT5BP51692 787 aa16.13■□□□□ 0.17
SNX6-210ENST00000557341 MRPS6P82932 125 aaKnown RBP16.13■□□□□ 0.17
SNX6-210ENST00000557341 SETQ01105 290 aaPredicted RBP16.13■□□□□ 0.17
SNX6-210ENST00000557341 AKAP17AQ02040 695 aaKnown RBP16.13■□□□□ 0.17
SNX6-210ENST00000557341 LPIN1Q14693 890 aa16.13■□□□□ 0.17
SNX6-210ENST00000557341 PLCB4Q15147 1175 aa16.13■□□□□ 0.17
SNX6-210ENST00000557341 TSHZ1Q6ZSZ6 1077 aa16.13■□□□□ 0.17
SNX6-210ENST00000557341 HLA-CQ95604 372 aa16.13■□□□□ 0.17
SNX6-210ENST00000557341 PLXNA4Q9HCM2 1894 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 FAM86B1E9PN63 330 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 M0QZ92 97 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 DDX39AO00148 427 aaKnown RBP16.12■□□□□ 0.17
SNX6-210ENST00000557341 PRPF3O43395 683 aaKnown RBP16.12■□□□□ 0.17
SNX6-210ENST00000557341 FAM86B2P0C5J1 330 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 GNA11P29992 359 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 KCNQ1P51787 676 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 PKN1Q16512 942 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 FBXO47Q5MNV8 452 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 IER5Q5VY09 327 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 PLA2G4DQ86XP0 818 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 CCDC148Q8NFR7 591 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 CRYGNQ8WXF5 182 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 PHKBQ93100 1093 aa16.12■□□□□ 0.17
SNX6-210ENST00000557341 RNF26Q9BY78 433 aaPredicted RBP16.12■□□□□ 0.17
SNX6-210ENST00000557341 FAM49AQ9H0Q0 323 aaPredicted RBP16.12■□□□□ 0.17
SNX6-210ENST00000557341 IGLV3-22A0A075B6J6 115 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms