RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 FAM161BQ96MY7 647 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 SMARCAD1Q9H4L7 1026 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 ERAP1Q9NZ08 941 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 LAMA2P24043 3122 aaKnown RBP11.77□□□□□ -0.53
SNX6-208ENST00000556712 MICAL3Q7RTP6 2002 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 CCDC194A0A1B0GVG4 234 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 BACH1O14867 736 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 CHMP2AO43633 222 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 SLC37A4O43826 429 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 NBNO60934 754 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
SNX6-208ENST00000556712 XBP1P17861 261 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 RFC2P35250 354 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 PBX2P40425 430 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 ADAM17P78536 824 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 SMAD3P84022 425 aaKnown RBP11.76□□□□□ -0.53
SNX6-208ENST00000556712 GUCY1B3Q02153 619 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 PLCB4Q15147 1175 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 LETM2Q2VYF4 491 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 GALNT17Q6IS24 598 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 ABHD15Q6UXT9 468 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 PIK3AP1Q6ZUJ8 805 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 KRT25Q7Z3Z0 450 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 RPUSD2Q8IZ73 545 aaKnown RBP11.76□□□□□ -0.53
SNX6-208ENST00000556712 DEFB123Q8N688 67 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 WASF1Q92558 559 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 OSBPL7Q9BZF2 842 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 FTOQ9C0B1 505 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNX6-208ENST00000556712 AZI2Q9H6S1 392 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 LOXHD1Q8IVV2 1947 aa11.76□□□□□ -0.53
SNX6-208ENST00000556712 IGKV6D-21A0A0A0MT36 114 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 ATG7O95352 703 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 INSRRP14616 1297 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 KRT2P35908 639 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 STAT5BP51692 787 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 USP11P51784 963 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 RABEP1Q15276 862 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 MARCH8Q5T0T0 291 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 KRT40Q6A162 431 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 FAM177A1Q8N128 213 aaPredicted RBP11.75□□□□□ -0.53
SNX6-208ENST00000556712 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 UPF2Q9HAU5 1272 aaKnown RBP11.75□□□□□ -0.53
SNX6-208ENST00000556712 ZNF302Q9NR11 478 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 TBC1D22BQ9NU19 505 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 TCEAL9Q9UHQ7 104 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 TUBE1Q9UJT0 475 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 NRCAMQ92823 1304 aa11.75□□□□□ -0.53
SNX6-208ENST00000556712 WNT7AO00755 349 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 GAS7O60861 476 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 MMP1P03956 469 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 PFKMP08237 780 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 GNAT1P11488 350 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 ATP4AP20648 1035 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 DNAJB2P25686 324 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 RABGGTBP53611 331 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 KRT76Q01546 638 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 Q4G0T1 1027 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 ZNF697Q5TEC3 545 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 LRCH2Q5VUJ6 765 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 ZNF746Q6NUN9 644 aaPredicted RBP11.74□□□□□ -0.53
SNX6-208ENST00000556712 SWSAP1Q6NVH7 229 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 MIS18BP1Q6P0N0 1132 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 PDXDC2PQ6P474 469 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 PLPPR4Q7Z2D5 763 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 TRMT1LQ7Z2T5 733 aaKnown RBP11.74□□□□□ -0.53
SNX6-208ENST00000556712 NEK8Q86SG6 692 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
SNX6-208ENST00000556712 SLC5A5Q92911 643 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 MBOAT7Q96N66 472 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 TEKT3Q9BXF9 490 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 PBX4Q9BYU1 374 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 FAM49AQ9H0Q0 323 aaPredicted RBP11.74□□□□□ -0.53
SNX6-208ENST00000556712 MTIF3Q9H2K0 278 aaKnown RBP11.74□□□□□ -0.53
SNX6-208ENST00000556712 TTYH1Q9H313 450 aaPredicted RBP11.74□□□□□ -0.53
SNX6-208ENST00000556712 UNC45AQ9H3U1 944 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 DDX25Q9UHL0 483 aaKnown RBP11.74□□□□□ -0.53
SNX6-208ENST00000556712 IGSF9BQ9UPX0 1349 aa11.74□□□□□ -0.53
SNX6-208ENST00000556712 CYP3A7-CYP3A51PA0A087WV96 503 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.73□□□□□ -0.53
SNX6-208ENST00000556712 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.73□□□□□ -0.53
SNX6-208ENST00000556712 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 WDR64B1ANS9 1081 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 BTBD18B2RXH4 712 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 CCNT1O60563 726 aaKnown RBP11.73□□□□□ -0.53
SNX6-208ENST00000556712 PSMD10O75832 226 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 CXCL10P02778 98 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 ACTN1P12814 892 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 CYP3A7P24462 503 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 UGCGQ16739 394 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 FAM160B1Q5W0V3 765 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 MOXD1Q6UVY6 613 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 TMCO2Q7Z6W1 182 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms