RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 MEIS2O14770 477 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 EYA4O95677 639 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 RPLP2P05387 115 aaKnown RBP14.56□□□□□ -0.08
SHMT2-223ENST00000556689 CYP21A2P08686 494 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 MARK3P27448 753 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 CAMK1Q14012 370 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 IER5Q5VY09 327 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 BMP8AQ7Z5Y6 402 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 RALYLQ86SE5 291 aaKnown RBP14.56□□□□□ -0.08
SHMT2-223ENST00000556689 CMTR2Q8IYT2 770 aaKnown RBP14.56□□□□□ -0.08
SHMT2-223ENST00000556689 NCOA7Q8NI08 942 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 SPPL3Q8TCT6 385 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 GPRASP2Q96D09 838 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 RRP36Q96EU6 259 aaKnown RBP14.56□□□□□ -0.08
SHMT2-223ENST00000556689 MSLNLQ96KJ4 702 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 FTHL17Q9BXU8 183 aa14.56□□□□□ -0.08
SHMT2-223ENST00000556689 AGO3Q9H9G7 860 aaKnown RBP14.56□□□□□ -0.08
SHMT2-223ENST00000556689 RRN3P2A6NIE6 340 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 KCNA2P16389 499 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 SMARCA1P28370 1054 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 CD52P31358 61 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 IGBP1P78318 339 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 MRPS6P82932 125 aaKnown RBP14.55□□□□□ -0.08
SHMT2-223ENST00000556689 MARCH8Q5T0T0 291 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 RTN4RL1Q86UN2 441 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-223ENST00000556689 IGDCC4Q8TDY8 1250 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 MAP3K14Q99558 947 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 SPZ1Q9BXG8 430 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 SEC63Q9UGP8 760 aaKnown RBP14.55□□□□□ -0.08
SHMT2-223ENST00000556689 MRPL42Q9Y6G3 142 aaKnown RBP14.55□□□□□ -0.08
SHMT2-223ENST00000556689 SQORQ9Y6N5 450 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 LAMA4Q16363 1823 aa14.55□□□□□ -0.08
SHMT2-223ENST00000556689 E7EWF7 191 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 ITGB1P05556 798 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 STAG3L1P0CL83 205 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 ITGB5P18084 799 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 DNAJB1P25685 340 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 KIF5BP33176 963 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 PKN1Q16512 942 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 NPAS4Q8IUM7 802 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 CRIPAKQ8N1N5 446 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 EFHBQ8N7U6 833 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 KLHL23Q8NBE8 558 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-223ENST00000556689 POF1BQ8WVV4 589 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 RUFY2Q8WXA3 655 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 TNPO1Q92973 898 aaKnown RBP14.54□□□□□ -0.08
SHMT2-223ENST00000556689 PBXIP1Q96AQ6 731 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 PSTPIP2Q9H939 334 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 CLEC1BQ9P126 229 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 MYO7AQ13402 2215 aa14.54□□□□□ -0.08
SHMT2-223ENST00000556689 TMEM221A6NGB7 291 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 M0QZ92 97 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 M0R296 226 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 MAFGO15525 162 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 INSRRP14616 1297 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 PTH1RQ03431 593 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 COASYQ13057 564 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 MTMR1Q13613 665 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 PAN2Q504Q3 1202 aaKnown RBP14.53□□□□□ -0.08
SHMT2-223ENST00000556689 TRIM67Q6ZTA4 783 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 ADGRD2Q7Z7M1 963 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 SMRP1Q8NCR6 262 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 LINC01599Q8WXQ3 324 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 PRRX2Q99811 253 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 LZTS2Q9BRK4 669 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 FAM49AQ9H0Q0 323 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-223ENST00000556689 PADI3Q9ULW8 664 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 UBIAD1Q9Y5Z9 338 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 TRIOO75962 3097 aa14.53□□□□□ -0.08
SHMT2-223ENST00000556689 BAZ2BQ9UIF8 2168 aaKnown RBP14.52□□□□□ -0.08
SHMT2-223ENST00000556689 LOC730098B7Z3J9 87 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 NRIP1P48552 1158 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 GNAQP50148 359 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 IER5LQ5T953 404 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 RBM23Q86U06 439 aaKnown RBP14.52□□□□□ -0.09
SHMT2-223ENST00000556689 MICAL1Q8TDZ2 1067 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 ZBTB10Q96DT7 871 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 AZI2Q9H6S1 392 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 JADE2Q9NQC1 790 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 PKD2L1Q9P0L9 805 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 LRFN2Q9ULH4 789 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 PCDHA2Q9Y5H9 948 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 TRPV2Q9Y5S1 764 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 RALGAPA2Q2PPJ7 1873 aa14.52□□□□□ -0.09
SHMT2-223ENST00000556689 NLRC5Q86WI3 1866 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 PPFIA3O75145 1194 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 DDAH1O94760 285 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 SCG2P13521 617 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 PTPN5P54829 565 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 ANTXR2P58335 489 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 ZXDAP98168 799 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 PAK2Q13177 524 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 SUGP1Q8IWZ8 645 aaKnown RBP14.51□□□□□ -0.09
SHMT2-223ENST00000556689 ZNF654Q8IZM8 581 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 NME8Q8N427 588 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 SRBD1Q8N5C6 995 aaKnown RBP14.51□□□□□ -0.09
SHMT2-223ENST00000556689 PHOX2BQ99453 314 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 MYL10Q9BUA6 226 aa14.51□□□□□ -0.09
SHMT2-223ENST00000556689 CELF4Q9BZC1 486 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms