RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 ZSWIM3Q96MP5 696 aa6.43□□□□□ -1.38
PCNX1-212ENST00000556516 ELF4Q99607 663 aaPredicted RBP6.43□□□□□ -1.38
PCNX1-212ENST00000556516 ORAI3Q9BRQ5 295 aa6.43□□□□□ -1.38
PCNX1-212ENST00000556516 PCIF1Q9H4Z3 704 aa6.43□□□□□ -1.38
PCNX1-212ENST00000556516 ATP8A1Q9Y2Q0 1164 aa6.43□□□□□ -1.38
PCNX1-212ENST00000556516 B3GALT1Q9Y5Z6 326 aa6.43□□□□□ -1.38
PCNX1-212ENST00000556516 EEA1Q15075 1411 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 TEX51A0A1B0GUA7 166 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 HRKO00198 91 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 ETV2O00321 342 aaPredicted RBP6.42□□□□□ -1.38
PCNX1-212ENST00000556516 TGM5O43548 720 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 PEX10O60683 326 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 EYA4O95677 639 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 TMEM253P0C7T8 217 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 FAHP16930 419 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 BPIP17213 487 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 KPNA1P52294 538 aaPredicted RBP6.42□□□□□ -1.38
PCNX1-212ENST00000556516 DHCR24Q15392 516 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 CATSPEREQ5SY80 951 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 SYDE1Q6ZW31 735 aaPredicted RBP6.42□□□□□ -1.38
PCNX1-212ENST00000556516 TRIM48Q8IWZ4 208 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 KCNN1Q92952 543 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 NOX5Q96PH1 765 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 SLC39A2Q9NP94 309 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 EMC7Q9NPA0 242 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 KCNH7Q9NS40 1196 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 TOMM22Q9NS69 142 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 NUB1Q9Y5A7 615 aa6.42□□□□□ -1.38
PCNX1-212ENST00000556516 hCG_2014768A0A024R1R8 64 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 NCAM1P13591 858 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 NCLP19338 710 aaKnown RBP6.41□□□□□ -1.38
PCNX1-212ENST00000556516 DLG4P78352 724 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 RBM10P98175 930 aaKnown RBP6.41□□□□□ -1.38
PCNX1-212ENST00000556516 CACNB2Q08289 660 aaPredicted RBP6.41□□□□□ -1.38
PCNX1-212ENST00000556516 MESP2Q0VG99 397 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 ARHGAP44Q17R89 818 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 CD276Q5ZPR3 534 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 ESRP1Q6NXG1 681 aaKnown RBP6.41□□□□□ -1.38
PCNX1-212ENST00000556516 PROSER1Q86XN7 944 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 KIF18BQ86Y91 864 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 RPUSD2Q8IZ73 545 aaKnown RBP6.41□□□□□ -1.38
PCNX1-212ENST00000556516 PRPF38AQ8NAV1 312 aaKnown RBP6.41□□□□□ -1.38
PCNX1-212ENST00000556516 DLG3Q92796 817 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 TTC1Q99614 292 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 IFT22Q9H7X7 185 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 FAN1Q9Y2M0 1017 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 RNF114Q9Y508 228 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 IRS2Q9Y4H2 1338 aa6.41□□□□□ -1.38
PCNX1-212ENST00000556516 ABCC8Q09428 1581 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 FOXP2O15409 715 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 CDK11BP21127 795 aaKnown RBP6.4□□□□□ -1.38
PCNX1-212ENST00000556516 SMAD4Q13485 552 aaKnown RBP6.4□□□□□ -1.38
PCNX1-212ENST00000556516 SSPNQ14714 243 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 ZNF174Q15697 407 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 ATP13A4Q4VNC1 1196 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 OGFOD2Q6N063 350 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 HDGFL2Q7Z4V5 671 aaPredicted RBP6.4□□□□□ -1.38
PCNX1-212ENST00000556516 TTLL11Q8NHH1 800 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 ASB15Q8WXK1 588 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 GORASP1Q9BQQ3 440 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 VTA1Q9NP79 307 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 UCKL1Q9NWZ5 548 aa6.4□□□□□ -1.38
PCNX1-212ENST00000556516 N4BP3O15049 544 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 SEMA7AO75326 666 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 CYP2C8P10632 490 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 PFKLP17858 780 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 IBSPP21815 317 aaPredicted RBP6.39□□□□□ -1.39
PCNX1-212ENST00000556516 IGFBP6P24592 240 aaPredicted RBP6.39□□□□□ -1.39
PCNX1-212ENST00000556516 GJA4P35212 333 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 GLRBP48167 497 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 LSSP48449 732 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 NKX3-2P78367 333 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 FOXO4P98177 505 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 ZCRB1Q8TBF4 217 aaKnown RBP6.39□□□□□ -1.39
PCNX1-212ENST00000556516 WDR66Q8TBY9 1149 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
PCNX1-212ENST00000556516 GBP4Q96PP9 640 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 NOP58Q9Y2X3 529 aaKnown RBP6.39□□□□□ -1.39
PCNX1-212ENST00000556516 FANCD2Q9BXW9 1451 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 LAMC3Q9Y6N6 1575 aa6.39□□□□□ -1.39
PCNX1-212ENST00000556516 PRAMEF22A3QJZ6 481 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 KATNA1O75449 491 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 PLA2G1BP04054 148 aaKnown RBP6.38□□□□□ -1.39
PCNX1-212ENST00000556516 KRT1P04264 644 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 PI3P19957 117 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 ANAPC15P60006 121 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 PFKPQ01813 784 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 DBPQ10586 325 aaPredicted RBP6.38□□□□□ -1.39
PCNX1-212ENST00000556516 RTP5Q14D33 572 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 TARBP2Q15633 366 aaKnown RBP6.38□□□□□ -1.39
PCNX1-212ENST00000556516 DDB1Q16531 1140 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 PRAMEF18Q5VWM3 479 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 LRSAM1Q6UWE0 723 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 ATG14Q6ZNE5 492 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 B3GNT8Q7Z7M8 397 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 ZC3H18Q86VM9 953 aaKnown RBP6.38□□□□□ -1.39
PCNX1-212ENST00000556516 TMEFF1Q8IYR6 380 aa6.38□□□□□ -1.39
PCNX1-212ENST00000556516 EFHBQ8N7U6 833 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms