RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TPM2P07951 284 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 GNAI3P08754 354 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 VIPR1P32241 457 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 DDIT3P35638 169 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 CORO7P57737 925 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 COL9A2Q14055 689 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-241ENST00000556374 RRS1Q15050 365 aaKnown RBP5.27□□□□□ -1.57
ATXN3-241ENST00000556374 HSF5Q4G112 596 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-241ENST00000556374 SEZ6Q53EL9 994 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 HLA-DQA1Q5Y7H0 255 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 CEP85Q6P2H3 762 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 CYP2R1Q6VVX0 501 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 GK5Q6ZS86 529 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 KIAA0825Q8IV33 1275 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 TMEM192Q8IY95 271 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 C7orf61Q8IZ16 206 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 TSPYL6Q8N831 410 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 DOT1LQ8TEK3 1739 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 PHACTR3Q96KR7 559 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 SPATA32Q96LK8 384 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 SLC6A18Q96N87 628 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 MKRN2Q9H000 416 aaKnown RBP5.27□□□□□ -1.57
ATXN3-241ENST00000556374 DCTPP1Q9H773 170 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 RRAGDQ9NQL2 400 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-241ENST00000556374 ERVK13-1Q9NX77 482 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 RTEL1Q9NZ71 1219 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 UBP1Q9NZI7 540 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 TSPYL4Q9UJ04 414 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 C5P01031 1676 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 PDE4DIPQ5VU43 2346 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 BRCA1P38398 1863 aaKnown RBP5.26□□□□□ -1.57
ATXN3-241ENST00000556374 C10orf71Q711Q0 1435 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 KIF13BQ9NQT8 1826 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 BAG4O95429 457 aaKnown RBP5.26□□□□□ -1.57
ATXN3-241ENST00000556374 GNAI2P04899 355 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 GSPT1P15170 499 aaKnown RBP5.26□□□□□ -1.57
ATXN3-241ENST00000556374 VAV1P15498 845 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 NOP2P46087 812 aaKnown RBP5.26□□□□□ -1.57
ATXN3-241ENST00000556374 AMPHP49418 695 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 PMS1P54277 932 aaKnown RBP5.26□□□□□ -1.57
ATXN3-241ENST00000556374 SNW1Q13573 536 aaKnown RBP5.26□□□□□ -1.57
ATXN3-241ENST00000556374 EIF4A2Q14240 407 aaKnown RBP5.26□□□□□ -1.57
ATXN3-241ENST00000556374 CCDC30Q5VVM6 783 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 SLC4A10Q6U841 1118 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 NLGN1Q8N2Q7 840 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 C8orf58Q8NAV2 365 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 CXorf38Q8TB03 319 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 MZB1Q8WU39 189 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 RELTQ969Z4 430 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 SPON2Q9BUD6 331 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 PANK2Q9BZ23 570 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 ZCCHC4Q9H5U6 513 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 CNTD2Q9H8S5 307 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 TNFRSF12AQ9NP84 129 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 KLHL14Q9P2G3 628 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 SLIT3O75094 1523 aa5.26□□□□□ -1.57
ATXN3-241ENST00000556374 ACEP12821 1306 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 AOX1Q06278 1338 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 IRS2Q9Y4H2 1338 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 TAF1LQ8IZX4 1826 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 AK9Q5TCS8 1911 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 RBAK-RBAKDNI3L0D1 243 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 SRGAP3O43295 1099 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 SASH1O94885 1247 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 ZNF445P59923 1031 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 CYP4F8P98187 520 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 DCTN1Q14203 1278 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 CLEC17AQ6ZS10 378 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 MCM10Q7L590 875 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 SP8Q8IXZ3 490 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 C20orf173Q96LM9 149 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 PLCD4Q9BRC7 762 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 LRRCC1Q9C099 1032 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 NMRK2Q9NPI5 230 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 FBXL21Q9UKT6 434 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 TOGARAM1Q9Y4F4 1720 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 ARFGEF1Q9Y6D6 1849 aa5.25□□□□□ -1.57
ATXN3-241ENST00000556374 CHL1O00533 1208 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 HTATSF1O43719 755 aaKnown RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 EFEMP2O95967 443 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 PTMAP06454 111 aaKnown RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 SDSP20132 328 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 MX1P20591 662 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 POLR2BP30876 1174 aaKnown RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 CTSKP43235 329 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 MAPKAPK2P49137 400 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 AFF3P51826 1226 aaKnown RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 ANAPC15P60006 121 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 FSTL1Q12841 308 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 CWF19L1Q69YN2 538 aaKnown RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 CAVIN1Q6NZI2 390 aaKnown RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 ZSCAN30Q86W11 494 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 SIRT2Q8IXJ6 389 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 NGDNQ8NEJ9 315 aaKnown RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 GIPC2Q8TF65 315 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 RILPL2Q969X0 211 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 GPATCH3Q96I76 525 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 SLC9A7Q96T83 725 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 MEIS3Q99687 375 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms