RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 EYA4O95677 639 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 SSBP05455 408 aaKnown RBP eCLIP10.29□□□□□ -0.76
ACTN1-218ENST00000556343 KRT18P05783 430 aaKnown RBP10.29□□□□□ -0.76
ACTN1-218ENST00000556343 PLA2G4BP0C869 781 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 ZNF865P0CJ78 1059 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-218ENST00000556343 CNGA1P29973 690 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 ADCYAP1R1P41586 468 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 CPT1AP50416 773 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 SLC26A2P50443 739 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 STAT5BP51692 787 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 CYP4A11Q02928 519 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 GRB10Q13322 594 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 CTTNQ14247 550 aaKnown RBP10.29□□□□□ -0.76
ACTN1-218ENST00000556343 POSTNQ15063 836 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 CAMK4Q16566 473 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 CCL14Q16627 93 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 PRAMEF19Q5SWL8 479 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 C4orf19Q8IY42 314 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 CKAP2LQ8IYA6 745 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 DNAJC5GQ8N7S2 189 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 PPTC7Q8NI37 304 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 GLG1Q92896 1179 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 SMARCE1Q969G3 411 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 PAGE5Q96GU1 130 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 FAM167AQ96KS9 214 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 PNMA5Q96PV4 448 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 LXNQ9BS40 222 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 KATNBL1Q9H079 304 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 SMARCAD1Q9H4L7 1026 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 ANKEF1Q9NU02 776 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 RMND1Q9NWS8 449 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 RGL1Q9NZL6 768 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 GABBR1Q9UBS5 961 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 PPME1Q9Y570 386 aa10.29□□□□□ -0.76
ACTN1-218ENST00000556343 ZNF236Q9UL36 1845 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 POTEB3A0JP26 581 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 ARHGEF35A5YM69 484 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 DYNC1LI2O43237 492 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 ACTN4O43707 911 aaKnown RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 MSCO60682 206 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 CCNE2O96020 404 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 SPATA31C1P0DKV0 1188 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 RARBP10826 455 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 SMPD1P17405 629 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 TCF7P36402 384 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 AFMP43652 599 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 DHX8Q14562 1220 aaKnown RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 E2F4Q16254 413 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 DGKDQ16760 1214 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 XKR3Q5GH77 459 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 UTP14CQ5TAP6 766 aaKnown RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 POTEBQ6S5H4 581 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 PLPPR4Q7Z2D5 763 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 SYT2Q8N9I0 419 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 BANK1Q8NDB2 785 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 AFAP1L1Q8TED9 768 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 TRIB2Q92519 343 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 GPR20Q99678 358 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 TIPINQ9BVW5 301 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 GZF1Q9H116 711 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 KCND2Q9NZV8 630 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 TMEM63CQ9P1W3 806 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 KIAA1468Q9P260 1216 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 KCNG1Q9UIX4 513 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 DBR1Q9UK59 544 aaKnown RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 ZNF215Q9UL58 517 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-218ENST00000556343 PLXNB2O15031 1838 aa10.28□□□□□ -0.76
ACTN1-218ENST00000556343 ZNFX1Q9P2E3 1918 aaKnown RBP10.27□□□□□ -0.76
ACTN1-218ENST00000556343 A0A087X0B3 334 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 IGKV6D-21A0A0A0MT36 114 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 PVALEFA0A1B0GWK0 134 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 GSTTP1A0A1W2PQM5 241 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 POTEFA5A3E0 1075 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 E9PMD0 336 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 SEPT4O43236 478 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 SORBS3O60504 671 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 IGHA2P01877 340 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 YWHABP31946 246 aaKnown RBP10.27□□□□□ -0.77
ACTN1-218ENST00000556343 GRK4P32298 578 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 CTCFP49711 727 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-218ENST00000556343 ARHGAP1Q07960 439 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 CACNB2Q08289 660 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-218ENST00000556343 MCM6Q14566 821 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 ZSCAN23Q3MJ62 389 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 POTEGQ6S5H5 508 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 SH3RF1Q7Z6J0 888 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 CCDC65Q8IXS2 484 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 COPS5Q92905 334 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 GSDMAQ96QA5 445 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 C7orf25Q9BPX7 421 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 JPH2Q9BR39 696 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-218ENST00000556343 KBTBD4Q9NVX7 518 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 DACH1Q9UI36 760 aa10.27□□□□□ -0.77
ACTN1-218ENST00000556343 GNEQ9Y223 722 aaKnown RBP10.27□□□□□ -0.77
ACTN1-218ENST00000556343 MAFBQ9Y5Q3 323 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-218ENST00000556343 THSD7BQ9C0I4 1608 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms