RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 KRT71Q3SY84 523 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 KLHDC7AQ5VTJ3 777 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 ZNF746Q6NUN9 644 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-208ENST00000554811 ERMNQ8TAM6 284 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 UBXN6Q9BZV1 441 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 MAGEF1Q9HAY2 307 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 BUB1BO60566 1050 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-208ENST00000554811 EPB41P11171 864 aaKnown RBP12.99□□□□□ -0.33
XRCC3-208ENST00000554811 PPP1R2P41236 205 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 KCNMA1Q12791 1236 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 CERKLQ49MI3 558 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-208ENST00000554811 TBC1D16Q8TBP0 767 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 TTYH3Q9C0H2 523 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
XRCC3-208ENST00000554811 NMT1P30419 496 aaKnown RBP12.98□□□□□ -0.33
XRCC3-208ENST00000554811 ICA1Q05084 483 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 ADCY1Q08828 1119 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 ATP8A1Q9Y2Q0 1164 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 GOLGA6L7A0A1B0GV03 622 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 ATP2B4P23634 1241 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 SLCO1A2P46721 670 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 ZNF543Q08ER8 600 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 GLYCTKQ8IVS8 523 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 DNAJC17Q9NVM6 304 aaKnown RBP12.98□□□□□ -0.33
XRCC3-208ENST00000554811 SPATA31A5Q5VU36 1347 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 SPATA31A7Q8IWB4 1347 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 PVALEFA0A1B0GWK0 134 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 CLRN2A0PK11 232 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 AGPSO00116 658 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 ZBTB5O15062 677 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 PPP1R11O60927 126 aaPredicted RBP12.98□□□□□ -0.33
XRCC3-208ENST00000554811 TMOD1P28289 359 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 CTNNBL1Q8WYA6 563 aaPredicted RBP12.98□□□□□ -0.33
XRCC3-208ENST00000554811 VEZTQ9HBM0 779 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 CEP72Q9P209 647 aa12.98□□□□□ -0.33
XRCC3-208ENST00000554811 LRP6O75581 1613 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 TM4SF1P30408 202 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 VPS41P49754 854 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 CPXCR1Q8N123 301 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 PPM1EQ8WY54 764 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 REEP2Q9BRK0 252 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 RIC8AQ9NPQ8 531 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 PTPN22Q9Y2R2 807 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 DAPK3O43293 454 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 TLR2O60603 784 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 NR1D1P20393 614 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 SETQ01105 290 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-208ENST00000554811 LRRC55Q6ZSA7 311 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 DAGLBQ8NCG7 672 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 SCFD1Q8WVM8 642 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 CASKIN2Q8WXE0 1202 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 HAS1Q92839 578 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 TEKT1Q969V4 418 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 MYH14Q7Z406 1995 aaKnown RBP12.97□□□□□ -0.33
XRCC3-208ENST00000554811 GPR75-ASB3A0A0A6YYF3 556 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 M0R2N6 131 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 H2AFZP0C0S5 128 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 ITGA4P13612 1032 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 ARHGAP4P98171 946 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 SLC10A5Q5PT55 438 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 H2AFVQ71UI9 128 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 MGARPQ8TDB4 240 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 BAP1Q92560 729 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
XRCC3-208ENST00000554811 TRIM51Q9BSJ1 452 aa12.97□□□□□ -0.33
XRCC3-208ENST00000554811 ECM29Q5VYK3 1845 aa12.96□□□□□ -0.33
XRCC3-208ENST00000554811 TARSL2A2RTX5 802 aaKnown RBP12.96□□□□□ -0.33
XRCC3-208ENST00000554811 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
XRCC3-208ENST00000554811 GOLGA8KD6RF30 607 aa12.96□□□□□ -0.33
XRCC3-208ENST00000554811 GCOM1H8Y6P7 765 aaPredicted RBP12.96□□□□□ -0.33
XRCC3-208ENST00000554811 EXOC3O60645 756 aa12.96□□□□□ -0.33
XRCC3-208ENST00000554811 AFPP02771 609 aaKnown RBP12.96□□□□□ -0.33
XRCC3-208ENST00000554811 MYZAPP0CAP1 466 aa12.96□□□□□ -0.33
XRCC3-208ENST00000554811 IFNAR2P48551 515 aa12.96□□□□□ -0.33
XRCC3-208ENST00000554811 DHX9Q08211 1270 aaKnown RBP12.96□□□□□ -0.33
XRCC3-208ENST00000554811 PSD3Q9NYI0 1048 aa12.96□□□□□ -0.33
XRCC3-208ENST00000554811 TMOD4Q9NZQ9 345 aa12.96□□□□□ -0.33
XRCC3-208ENST00000554811 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.96□□□□□ -0.33
XRCC3-208ENST00000554811 EP400Q96L91 3159 aa12.96□□□□□ -0.34
XRCC3-208ENST00000554811 FLOT1O75955 427 aa12.96□□□□□ -0.34
XRCC3-208ENST00000554811 TRIM37O94972 964 aa12.96□□□□□ -0.34
XRCC3-208ENST00000554811 RHBDL3P58872 404 aa12.96□□□□□ -0.34
XRCC3-208ENST00000554811 TTMPQ5BVD1 217 aa12.96□□□□□ -0.34
XRCC3-208ENST00000554811 NOVA2Q9UNW9 492 aaKnown RBP12.96□□□□□ -0.34
XRCC3-208ENST00000554811 FGGP02679 453 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 CYP11B2P19099 503 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 NBPF9Q3BBW0 867 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 CPLX4Q7Z7G2 160 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 FBXO11Q86XK2 927 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 MTMR9Q96QG7 549 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 CTTNBP2NLQ9P2B4 639 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 RABGAP1Q9Y3P9 1069 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms