RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ANKRD36CQ5JPF3 1778 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 ZNF609O15014 1411 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 PITPNM2Q9BZ72 1349 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 KIF2AO00139 706 aaPredicted RBP6.87□□□□□ -1.31
VPS33B-203ENST00000554264 SMARCA5O60264 1052 aaPredicted RBP6.87□□□□□ -1.31
VPS33B-203ENST00000554264 SSTR4P31391 388 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 ZNF280AP59817 542 aaPredicted RBP6.87□□□□□ -1.31
VPS33B-203ENST00000554264 ETF1P62495 437 aaKnown RBP6.87□□□□□ -1.31
VPS33B-203ENST00000554264 KRT85P78386 507 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 MTX1Q13505 466 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 SF3B3Q15393 1217 aaKnown RBP6.87□□□□□ -1.31
VPS33B-203ENST00000554264 PROSER3Q2NL68 480 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 HABP4Q5JVS0 413 aaKnown RBP6.87□□□□□ -1.31
VPS33B-203ENST00000554264 SLC4A10Q6U841 1118 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 COPS6Q7L5N1 327 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 OTUD7AQ8TE49 926 aaPredicted RBP6.87□□□□□ -1.31
VPS33B-203ENST00000554264 RILPL2Q969X0 211 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
VPS33B-203ENST00000554264 TTC14Q96N46 770 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 OSBPL1AQ9BXW6 950 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 UBP1Q9NZI7 540 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 HMG20BQ9P0W2 317 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 PAXBP1Q9Y5B6 917 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 CYP46A1Q9Y6A2 500 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 TACC3Q9Y6A5 838 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 AKAP11Q9UKA4 1901 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 PAPPA2Q9BXP8 1791 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 LRRC37AA6NMS7 1700 aa6.87□□□□□ -1.31
VPS33B-203ENST00000554264 CTAGE5O15320 804 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 HYAL3O43820 417 aaPredicted RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 FKTNO75072 461 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 ALDH1L1O75891 902 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 ADCY5O95622 1261 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 TBC1D8O95759 1140 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 ANXA1P04083 346 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 HSP90B1P14625 803 aaKnown RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 NF2P35240 595 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 TM4SF4P48230 202 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 CD97P48960 835 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 GPSM2P81274 684 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 SREBF2Q12772 1141 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 AIMP1Q12904 312 aaKnown RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 KRT32Q14532 448 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 ANGEL2Q5VTE6 544 aaKnown RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 ATL3Q6DD88 541 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 ARMCX6Q7L4S7 300 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 REC114Q7Z4M0 266 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 HID1Q8IV36 788 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 CLASRPQ8N2M8 674 aaKnown RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 TOP6BLQ8N6T0 577 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 RIN3Q8TB24 985 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 TBC1D16Q8TBP0 767 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 XAGE3Q8WTP9 111 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 CELF1Q92879 486 aaKnown RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 ACSF2Q96CM8 615 aaPredicted RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 EVI5LQ96CN4 794 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 HEXIM2Q96MH2 286 aaKnown RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 DDX41Q9UJV9 622 aaKnown RBP6.86□□□□□ -1.31
VPS33B-203ENST00000554264 EXOC6BQ9Y2D4 811 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 MYH15Q9Y2K3 1946 aa6.86□□□□□ -1.31
VPS33B-203ENST00000554264 LAMB2P55268 1798 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 DDX60Q8IY21 1712 aaKnown RBP6.85□□□□□ -1.31
VPS33B-203ENST00000554264 ASTN2O75129 1339 aaPredicted RBP6.85□□□□□ -1.31
VPS33B-203ENST00000554264 UPK3BL1B0FP48 263 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 UPK3BL2E5RIL1 263 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 ADAMTS4O75173 837 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 UFL1O94874 794 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 LRIG2O94898 1065 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 SLITRK5O94991 958 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 EOMESO95936 686 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 PGRP06401 933 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 FOSL1P15407 271 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 SYT1P21579 422 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 CAP2P40123 477 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 RPS8P62241 208 aaKnown RBP6.85□□□□□ -1.31
VPS33B-203ENST00000554264 MPP2Q14168 576 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 PLBD2Q8NHP8 589 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 KIAA1524Q8TCG1 905 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 FUCA2Q9BTY2 467 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 LSG1Q9H089 658 aaKnown RBP6.85□□□□□ -1.31
VPS33B-203ENST00000554264 BRMS1Q9HCU9 246 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 MYOZ2Q9NPC6 264 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 LEMD3Q9Y2U8 911 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 SNX14Q9Y5W7 946 aa6.85□□□□□ -1.31
VPS33B-203ENST00000554264 LRRFIP2Q9Y608 721 aaKnown RBP6.85□□□□□ -1.31
VPS33B-203ENST00000554264 GOLGA6L4A6NEF3 574 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 UBE2Q2LH0YL09 131 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 CTIFO43310 598 aaKnown RBP6.84□□□□□ -1.31
VPS33B-203ENST00000554264 DNAJA2O60884 412 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 SURF6O75683 361 aaKnown RBP6.84□□□□□ -1.31
VPS33B-203ENST00000554264 BPNT1O95861 308 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 MMP14P50281 582 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 AK2P54819 239 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 DMTNQ08495 405 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 PRAMEF13Q5VWM6 474 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 RBM43Q6ZSC3 357 aaKnown RBP6.84□□□□□ -1.31
VPS33B-203ENST00000554264 ARMC9Q7Z3E5 817 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 KCT2Q8NC54 265 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 PI4K2BQ8TCG2 481 aa6.84□□□□□ -1.31
VPS33B-203ENST00000554264 FAM89AQ96GI7 184 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms