RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 RGS22Q8NE09 1264 aa19.65■□□□□ 0.74
NEK9-204ENST00000554258 TAAR1Q96RJ0 339 aa19.65■□□□□ 0.74
NEK9-204ENST00000554258 FRMPD2Q68DX3 1309 aaPredicted RBP19.65■□□□□ 0.74
NEK9-204ENST00000554258 WDR19Q8NEZ3 1342 aa19.65■□□□□ 0.74
NEK9-204ENST00000554258 CACNA1IQ9P0X4 2223 aa19.64■□□□□ 0.74
NEK9-204ENST00000554258 TSPY2A6NKD2 308 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 EIF3JO75822 258 aaKnown RBP19.64■□□□□ 0.73
NEK9-204ENST00000554258 CHRNA1P02708 482 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 ADRB1P08588 477 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 USH1GQ495M9 461 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 TPRNQ4KMQ1 711 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 PDE12Q6L8Q7 609 aaKnown RBP19.64■□□□□ 0.73
NEK9-204ENST00000554258 ZDHHC14Q8IZN3 488 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 RMDN3Q96TC7 470 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 FBXL21Q9UKT6 434 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 CDV3Q9UKY7 258 aaKnown RBP19.64■□□□□ 0.73
NEK9-204ENST00000554258 PCDHB12Q9Y5F1 795 aa19.64■□□□□ 0.73
NEK9-204ENST00000554258 STK25O00506 426 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 ERVFC1P60507 584 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 LPIN1Q14693 890 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 TTC22Q5TAA0 569 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 TICAM2Q86XR7 235 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 NPAS4Q8IUM7 802 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 SIX5Q8N196 739 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 RASGRP4Q8TDF6 673 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 SYTL5Q8TDW5 730 aaPredicted RBP19.63■□□□□ 0.73
NEK9-204ENST00000554258 EHMT1Q9H9B1 1298 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 ERVK-5Q9HDB9 667 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 IL17RBQ9NRM6 502 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 SETD4Q9NVD3 440 aa19.63■□□□□ 0.73
NEK9-204ENST00000554258 DCDC2BA2VCK2 349 aa19.62■□□□□ 0.73
NEK9-204ENST00000554258 GGPS1O95749 300 aa19.62■□□□□ 0.73
NEK9-204ENST00000554258 GNAT2P19087 354 aa19.62■□□□□ 0.73
NEK9-204ENST00000554258 CELF3Q5SZQ8 465 aaKnown RBP19.62■□□□□ 0.73
NEK9-204ENST00000554258 SPOUT1Q5T280 376 aaKnown RBP19.62■□□□□ 0.73
NEK9-204ENST00000554258 PLPP4Q5VZY2 271 aa19.62■□□□□ 0.73
NEK9-204ENST00000554258 PLCD3Q8N3E9 789 aa19.62■□□□□ 0.73
NEK9-204ENST00000554258 COL20A1Q9P218 1284 aa19.62■□□□□ 0.73
NEK9-204ENST00000554258 ASPMQ8IZT6 3477 aa19.62■□□□□ 0.73
NEK9-204ENST00000554258 GPAA1O43292 621 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 FGF18O76093 207 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 STAG3L1P0CL83 205 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 GSPT1P15170 499 aaKnown RBP19.61■□□□□ 0.73
NEK9-204ENST00000554258 EIF2AK2P19525 551 aaKnown RBP19.61■□□□□ 0.73
NEK9-204ENST00000554258 MTHFRP42898 656 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 ITIH3Q06033 890 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 ARHGEF16Q5VV41 709 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 KBTBD3Q8NAB2 608 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 TBC1D5Q92609 795 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 OSBP2Q969R2 916 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 ADAM7Q9H2U9 754 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 SH2B1Q9NRF2 756 aaPredicted RBP19.61■□□□□ 0.73
NEK9-204ENST00000554258 AAASQ9NRG9 546 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 TMEM260Q9NX78 707 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 NCDNQ9UBB6 729 aa19.61■□□□□ 0.73
NEK9-204ENST00000554258 CEP295Q9C0D2 2601 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 FSCN2O14926 492 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 LGALS2P05162 132 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 RFX1P22670 979 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 GATMP50440 423 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 ARHGAP4P98171 946 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 THNSL1Q8IYQ7 743 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 IFNL3Q8IZI9 196 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 GPR161Q8N6U8 529 aaKnown RBP19.6■□□□□ 0.73
NEK9-204ENST00000554258 SUMF1Q8NBK3 374 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 LINC01599Q8WXQ3 324 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 CASP10Q92851 521 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 EVI5LQ96CN4 794 aa19.6■□□□□ 0.73
NEK9-204ENST00000554258 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
NEK9-204ENST00000554258 MYH6P13533 1939 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 FNDC1Q4ZHG4 1894 aaPredicted RBP19.59■□□□□ 0.73
NEK9-204ENST00000554258 PRR5-ARHGAP8B1AHC4 643 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 NR3C2P08235 984 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 SP9P0CG40 484 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 HOXB3P14651 431 aaPredicted RBP19.59■□□□□ 0.73
NEK9-204ENST00000554258 ARHGAP8P85298 464 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 CRIPAKQ8N1N5 446 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 RTKNQ9BST9 563 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 NACAP1Q9BZK3 213 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 MAF1Q9H063 256 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 MLXIPQ9HAP2 919 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 LOXHD1Q8IVV2 1947 aa19.59■□□□□ 0.73
NEK9-204ENST00000554258 CCDC171Q6TFL3 1326 aa19.58■□□□□ 0.73
NEK9-204ENST00000554258 PPARAQ07869 468 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 DMWDQ09019 674 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 APOBRQ0VD83 1088 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 TDGQ13569 410 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 BMP2KLQ5H9B9 411 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 KCNV1Q6PIU1 500 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 LMBR1Q8WVP7 490 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 APPBP2Q92624 585 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 ENTPD7Q9NQZ7 604 aa19.58■□□□□ 0.72
NEK9-204ENST00000554258 DBR1Q9UK59 544 aaKnown RBP19.58■□□□□ 0.72
NEK9-204ENST00000554258 CNOT1A5YKK6 2376 aaKnown RBP19.58■□□□□ 0.72
NEK9-204ENST00000554258 FRYQ5TBA9 3013 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 PATL2C9JE40 543 aaKnown RBP19.57■□□□□ 0.72
NEK9-204ENST00000554258 KINO60870 393 aaKnown RBP19.57■□□□□ 0.72
NEK9-204ENST00000554258 WEE2P0C1S8 567 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 LMNB2Q03252 620 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 COL9A3Q14050 684 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms