RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 WIZO95785 1651 aa7.04□□□□□ -1.28
ATXN3-225ENST00000554214 MROH6A6NGR9 719 aa7.04□□□□□ -1.28
ATXN3-225ENST00000554214 MAN2B1O00754 1011 aa7.04□□□□□ -1.28
ATXN3-225ENST00000554214 GLRBP48167 497 aa7.04□□□□□ -1.28
ATXN3-225ENST00000554214 LACTBP83111 547 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-225ENST00000554214 CD276Q5ZPR3 534 aa7.04□□□□□ -1.28
ATXN3-225ENST00000554214 TRMT10BQ6PF06 316 aaKnown RBP7.04□□□□□ -1.28
ATXN3-225ENST00000554214 FAM124AQ86V42 546 aa7.04□□□□□ -1.28
ATXN3-225ENST00000554214 TMEM168Q9H0V1 697 aa7.04□□□□□ -1.28
ATXN3-225ENST00000554214 NCOA5Q9HCD5 579 aaKnown RBP7.04□□□□□ -1.28
ATXN3-225ENST00000554214 B8ZZF3 427 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 KCNK3O14649 394 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 KCNQ2O43526 872 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 RAPGEF3O95398 923 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 SYN1P17600 705 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 PTPN1P18031 435 aaKnown RBP7.03□□□□□ -1.28
ATXN3-225ENST00000554214 CNR2P34972 360 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 SQSTM1Q13501 440 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 SKIDA1Q1XH10 827 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 ERICH6BQ5W0A0 696 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 BRAPQ7Z569 592 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 FGD2Q7Z6J4 655 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 SH3TC2Q8TF17 1288 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 LCORQ96JN0 433 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-225ENST00000554214 ARHGAP20Q9P2F6 1191 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 COQ6Q9Y2Z9 468 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 FANCD2Q9BXW9 1451 aa7.03□□□□□ -1.28
ATXN3-225ENST00000554214 URB2Q14146 1524 aaKnown RBP7.02□□□□□ -1.29
ATXN3-225ENST00000554214 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-225ENST00000554214 TCRBV16S1A1N1A0A5B0 115 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 PLD2O14939 933 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 FBXO21O94952 628 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 DBPQ10586 325 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-225ENST00000554214 IGDCC4Q8TDY8 1250 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 ZCCHC14Q8WYQ9 949 aaKnown RBP7.02□□□□□ -1.29
ATXN3-225ENST00000554214 YTHDC1Q96MU7 727 aaKnown RBP7.02□□□□□ -1.29
ATXN3-225ENST00000554214 PIF1Q9H611 641 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 KANSL2Q9H9L4 492 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 SLC39A2Q9NP94 309 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
ATXN3-225ENST00000554214 ZNF608Q9ULD9 1512 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-225ENST00000554214 C9orf118A6NHY6 69 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 ZNF839A8K0R7 811 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 PRRG2O14669 202 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 KCNA6P17658 529 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 GJA4P35212 333 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 PLP2Q04941 152 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 FIGNQ5HY92 759 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 LGI4Q8N135 537 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 CISD2Q8N5K1 135 aaKnown RBP7.01□□□□□ -1.29
ATXN3-225ENST00000554214 STPG3Q8N7X2 389 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 CLUHP3Q96NS8 147 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 TRIM39Q9HCM9 518 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 ZFP69BQ9UJL9 534 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 ZDHHC9Q9Y397 364 aa7.01□□□□□ -1.29
ATXN3-225ENST00000554214 CLASP2O75122 1294 aaKnown RBP7□□□□□ -1.29
ATXN3-225ENST00000554214 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
ATXN3-225ENST00000554214 ABHD17CQ6PCB6 329 aa7□□□□□ -1.29
ATXN3-225ENST00000554214 BORAQ6PGQ7 559 aa7□□□□□ -1.29
ATXN3-225ENST00000554214 OVCH1Q7RTY7 1134 aa7□□□□□ -1.29
ATXN3-225ENST00000554214 IGSF22Q8N9C0 903 aa7□□□□□ -1.29
ATXN3-225ENST00000554214 CELF4Q9BZC1 486 aaKnown RBP7□□□□□ -1.29
ATXN3-225ENST00000554214 INVSQ9Y283 1065 aa7□□□□□ -1.29
ATXN3-225ENST00000554214 PPP1R12AO14974 1030 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-225ENST00000554214 NPTXRO95502 500 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 IL18BPO95998 194 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 KNG1P01042 644 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 CHGBP05060 677 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 CELA3BP08861 270 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 COL6A1P12109 1028 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 SEC23AQ15436 765 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 FNDC3BQ53EP0 1204 aaKnown RBP6.99□□□□□ -1.29
ATXN3-225ENST00000554214 HHIPL2Q6UWX4 724 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 TACO1Q9BSH4 297 aaKnown RBP6.99□□□□□ -1.29
ATXN3-225ENST00000554214 BDH2Q9BUT1 245 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 ARHGAP28Q9P2N2 729 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 NCANO14594 1321 aa6.99□□□□□ -1.29
ATXN3-225ENST00000554214 PRAMEF25A6NGN4 478 aa6.98□□□□□ -1.29
ATXN3-225ENST00000554214 SCDO00767 359 aa6.98□□□□□ -1.29
ATXN3-225ENST00000554214 C4BPAP04003 597 aaKnown RBP6.98□□□□□ -1.29
ATXN3-225ENST00000554214 CPZQ66K79 652 aa6.98□□□□□ -1.29
ATXN3-225ENST00000554214 BARX1Q9HBU1 254 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-225ENST00000554214 KCND1Q9NSA2 647 aa6.98□□□□□ -1.29
ATXN3-225ENST00000554214 ARAP1Q96P48 1450 aa6.98□□□□□ -1.29
ATXN3-225ENST00000554214 KLHL18O94889 574 aa6.97□□□□□ -1.29
ATXN3-225ENST00000554214 ASMTLO95671 621 aa6.97□□□□□ -1.29
ATXN3-225ENST00000554214 NFATC3Q12968 1075 aa6.97□□□□□ -1.29
ATXN3-225ENST00000554214 SKOR2Q2VWA4 1001 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-225ENST00000554214 TMEM177Q53S58 311 aa6.97□□□□□ -1.29
ATXN3-225ENST00000554214 KLHL36Q8N4N3 616 aa6.97□□□□□ -1.29
ATXN3-225ENST00000554214 C2orf69Q8N8R5 385 aa6.97□□□□□ -1.29
ATXN3-225ENST00000554214 MBD6Q96DN6 1003 aa6.97□□□□□ -1.29
ATXN3-225ENST00000554214 RNPC3Q96LT9 517 aaKnown RBP6.97□□□□□ -1.29
ATXN3-225ENST00000554214 TMEM260Q9NX78 707 aa6.97□□□□□ -1.29
ATXN3-225ENST00000554214 CHD1O14646 1710 aa6.96□□□□□ -1.29
ATXN3-225ENST00000554214 SLC12A8A0AV02 714 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms