RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TBC1D8O95759 1140 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 GH1P01241 217 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 SUPT20HL2P0C7V6 817 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 PLA2G4BP0C869 781 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 TXNP10599 105 aaKnown RBP8.54□□□□□ -1.04
TDP1-209ENST00000554180 HSPA6P17066 643 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 HOXD10P28358 340 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 CTGFP29279 349 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 SLC12A3P55017 1021 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 MAP2K1Q02750 393 aaPredicted RBP8.54□□□□□ -1.04
TDP1-209ENST00000554180 ACVR2BQ13705 512 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 LAMC2Q13753 1193 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 CTTNQ14247 550 aaKnown RBP8.54□□□□□ -1.04
TDP1-209ENST00000554180 MCM6Q14566 821 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 KCNB1Q14721 858 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 ARHGEF6Q15052 776 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 CT47A1Q5JQC4 288 aaPredicted RBP8.54□□□□□ -1.04
TDP1-209ENST00000554180 CELF3Q5SZQ8 465 aaKnown RBP8.54□□□□□ -1.04
TDP1-209ENST00000554180 IQSEC1Q6DN90 963 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 TAPT1Q6NXT6 567 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 ABHD15Q6UXT9 468 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 KCNK18Q7Z418 384 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 TPH2Q8IWU9 490 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 GRAMD1CQ8IYS0 662 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 SYT2Q8N9I0 419 aaPredicted RBP8.54□□□□□ -1.04
TDP1-209ENST00000554180 CCDC47Q96A33 483 aaKnown RBP8.54□□□□□ -1.04
TDP1-209ENST00000554180 PLIN2Q99541 437 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 MLXIPQ9HAP2 919 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 DBR1Q9UK59 544 aaKnown RBP8.54□□□□□ -1.04
TDP1-209ENST00000554180 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 PLXNA1Q9UIW2 1896 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 KIAA1217Q5T5P2 1943 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 ZNFX1Q9P2E3 1918 aaKnown RBP8.53□□□□□ -1.04
TDP1-209ENST00000554180 FSD2A1L4K1 749 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 E9PMD0 336 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 GPR25O00155 361 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 NOP56O00567 594 aaKnown RBP8.53□□□□□ -1.04
TDP1-209ENST00000554180 RHOBTB3O94955 611 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 PRR29P0C7W0 189 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 SLC26A2P50443 739 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 NLRP12P59046 1061 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 ASIC1P78348 528 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 CUL4BQ13620 913 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 MORC3Q14149 939 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 LY6KQ17RY6 165 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 DUSP28Q4G0W2 176 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 FAM160B1Q5W0V3 765 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 GPBP1Q86WP2 473 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 DHX37Q8IY37 1157 aaKnown RBP8.53□□□□□ -1.04
TDP1-209ENST00000554180 BANK1Q8NDB2 785 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 PPTC7Q8NI37 304 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 FAM200AQ8TCP9 573 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 AFAP1L1Q8TED9 768 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 SEPT1Q8WYJ6 367 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 DDX12PQ92771 950 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 SPATA33Q96N06 139 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 NAT10Q9H0A0 1025 aaKnown RBP8.53□□□□□ -1.04
TDP1-209ENST00000554180 BHMT2Q9H2M3 363 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 ANKEF1Q9NU02 776 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 WRAP73Q9P2S5 460 aaPredicted RBP8.53□□□□□ -1.04
TDP1-209ENST00000554180 DACH1Q9UI36 760 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 PPME1Q9Y570 386 aa8.53□□□□□ -1.04
TDP1-209ENST00000554180 MAFBQ9Y5Q3 323 aaPredicted RBP8.53□□□□□ -1.04
TDP1-209ENST00000554180 GOLGA6L3A6NEY3 463 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 MYMKA6NI61 221 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 BACH1O14867 736 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 FKTNO75072 461 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 LGR5O75473 907 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 RPN1P04843 607 aaKnown RBP8.52□□□□□ -1.05
TDP1-209ENST00000554180 ZNF865P0CJ78 1059 aaPredicted RBP8.52□□□□□ -1.05
TDP1-209ENST00000554180 HOXD8P13378 290 aaPredicted RBP8.52□□□□□ -1.05
TDP1-209ENST00000554180 CYP11B2P19099 503 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 CYP2B6P20813 491 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 GUCY2CP25092 1073 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 YWHABP31946 246 aaKnown RBP8.52□□□□□ -1.05
TDP1-209ENST00000554180 TCF7P36402 384 aaPredicted RBP8.52□□□□□ -1.05
TDP1-209ENST00000554180 PPP1R2P41236 205 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 ADCYAP1R1P41586 468 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 FLT3LGP49771 235 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 PRMT2P55345 433 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 PSMC6P62333 389 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 HTRA3P83110 453 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 PRKCZQ05513 592 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 ARHGAP1Q07960 439 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 UGCGQ16739 394 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 CCDC144BQ3MJ40 725 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 COBLL1Q53SF7 1204 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 XKR3Q5GH77 459 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 MFSD14CQ5VZR4 134 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 SWSAP1Q6NVH7 229 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 UNC13DQ70J99 1090 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 OTUD6AQ7L8S5 288 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 CCDC60Q8IWA6 550 aaPredicted RBP8.52□□□□□ -1.05
TDP1-209ENST00000554180 MLKLQ8NB16 471 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 STAMQ92783 540 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 ERCC4Q92889 916 aaPredicted RBP8.52□□□□□ -1.05
TDP1-209ENST00000554180 DNAJC19Q96DA6 116 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 FAM167AQ96KS9 214 aa8.52□□□□□ -1.05
TDP1-209ENST00000554180 CCDC43Q96MW1 224 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms