RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 CDH23Q9H251 3354 aa20.14■□□□□ 0.82
FOXN3-204ENST00000553840 GJB5O95377 273 aa20.14■□□□□ 0.81
FOXN3-204ENST00000553840 SLC26A2P50443 739 aa20.14■□□□□ 0.81
FOXN3-204ENST00000553840 TAP1Q03518 808 aa20.14■□□□□ 0.81
FOXN3-204ENST00000553840 FAM26DQ5JW98 314 aa20.14■□□□□ 0.81
FOXN3-204ENST00000553840 FAM160B1Q5W0V3 765 aa20.14■□□□□ 0.81
FOXN3-204ENST00000553840 RPAINQ86UA6 219 aa20.14■□□□□ 0.81
FOXN3-204ENST00000553840 RAD9AQ99638 391 aa20.14■□□□□ 0.81
FOXN3-204ENST00000553840 UPF3BQ9BZI7 483 aaKnown RBP20.14■□□□□ 0.81
FOXN3-204ENST00000553840 PDRG1Q9NUG6 133 aa20.14■□□□□ 0.81
FOXN3-204ENST00000553840 FAM86B1E9PN63 330 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 DDX39AO00148 427 aaKnown RBP20.13■□□□□ 0.81
FOXN3-204ENST00000553840 IPO5O00410 1097 aaKnown RBP20.13■□□□□ 0.81
FOXN3-204ENST00000553840 GTPBP6O43824 516 aaPredicted RBP20.13■□□□□ 0.81
FOXN3-204ENST00000553840 PPFIA3O75145 1194 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 ATG7O95352 703 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 FAM86B2P0C5J1 330 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 INSRRP14616 1297 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 NLRP5P59047 1200 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 IGBP1P78318 339 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 ITGB3BPQ13352 177 aaPredicted RBP20.13■□□□□ 0.81
FOXN3-204ENST00000553840 ADGRE1Q14246 886 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 CRYGNQ8WXF5 182 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 PCYT2Q99447 389 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 ZNF577Q9BSK1 485 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 CERS4Q9HA82 394 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 TBC1D22BQ9NU19 505 aa20.13■□□□□ 0.81
FOXN3-204ENST00000553840 MYH9P35579 1960 aaKnown RBP20.12■□□□□ 0.81
FOXN3-204ENST00000553840 MBLAC1A4D2B0 266 aaPredicted RBP20.12■□□□□ 0.81
FOXN3-204ENST00000553840 BACH1O14867 736 aa20.12■□□□□ 0.81
FOXN3-204ENST00000553840 DEXIO95424 95 aa20.12■□□□□ 0.81
FOXN3-204ENST00000553840 TCTN1Q2MV58 587 aa20.12■□□□□ 0.81
FOXN3-204ENST00000553840 MIS18BP1Q6P0N0 1132 aa20.12■□□□□ 0.81
FOXN3-204ENST00000553840 TMCO2Q7Z6W1 182 aaPredicted RBP20.12■□□□□ 0.81
FOXN3-204ENST00000553840 ARNTL2Q8WYA1 636 aa20.12■□□□□ 0.81
FOXN3-204ENST00000553840 C22orf23Q9BZE7 217 aa20.12■□□□□ 0.81
FOXN3-204ENST00000553840 TSPYL2Q9H2G4 693 aaPredicted RBP20.12■□□□□ 0.81
FOXN3-204ENST00000553840 VPS54Q9P1Q0 977 aa20.12■□□□□ 0.81
FOXN3-204ENST00000553840 INSL6Q9Y581 213 aa20.12■□□□□ 0.81
FOXN3-204ENST00000553840 IGLV3-22A0A075B6J6 115 aa20.11■□□□□ 0.81
FOXN3-204ENST00000553840 STK3Q13188 491 aa20.11■□□□□ 0.81
FOXN3-204ENST00000553840 PLCB4Q15147 1175 aa20.11■□□□□ 0.81
FOXN3-204ENST00000553840 CCDC85BQ15834 202 aaPredicted RBP20.11■□□□□ 0.81
FOXN3-204ENST00000553840 IER5Q5VY09 327 aa20.11■□□□□ 0.81
FOXN3-204ENST00000553840 FAM117BQ6P1L5 589 aa20.11■□□□□ 0.81
FOXN3-204ENST00000553840 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.11■□□□□ 0.81
FOXN3-204ENST00000553840 RUFY4Q6ZNE9 571 aa20.11■□□□□ 0.81
FOXN3-204ENST00000553840 MYOCDQ8IZQ8 938 aa20.11■□□□□ 0.81
FOXN3-204ENST00000553840 DNAJB3Q8WWF6 145 aa20.11■□□□□ 0.81
FOXN3-204ENST00000553840 IFIH1Q9BYX4 1025 aaKnown RBP20.11■□□□□ 0.81
FOXN3-204ENST00000553840 POTEB3A0JP26 581 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 M0QZ92 97 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 CDKL5O76039 1030 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 CHRNA1P02708 482 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 ANAPC15P60006 121 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 PRR16Q569H4 304 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 MARCH8Q5T0T0 291 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 POTEBQ6S5H4 581 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 ABHD15Q6UXT9 468 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 FAM177A1Q8N128 213 aaPredicted RBP20.1■□□□□ 0.81
FOXN3-204ENST00000553840 USP38Q8NB14 1042 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 RASGRP4Q8TDF6 673 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 LARP6Q9BRS8 491 aaKnown RBP20.1■□□□□ 0.81
FOXN3-204ENST00000553840 ZNF302Q9NR11 478 aa20.1■□□□□ 0.81
FOXN3-204ENST00000553840 IGKV6D-21A0A0A0MT36 114 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 HBP1O60381 514 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 CCNE2O96020 404 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 CIITAP33076 1130 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 USP11P51784 963 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 KRT76Q01546 638 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 ZNF746Q6NUN9 644 aaPredicted RBP20.09■□□□□ 0.81
FOXN3-204ENST00000553840 SMAP1Q8IYB5 467 aaPredicted RBP20.09■□□□□ 0.81
FOXN3-204ENST00000553840 MICALL1Q8N3F8 863 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 SYMPKQ92797 1274 aaKnown RBP20.09■□□□□ 0.81
FOXN3-204ENST00000553840 PCDHA4Q9UN74 947 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 PCDHA2Q9Y5H9 948 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 SIP14410 1827 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 CHD9Q3L8U1 2897 aa20.09■□□□□ 0.81
FOXN3-204ENST00000553840 LCHNA4D1U4 455 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 RFXAPO00287 272 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 ADAMTS3O15072 1205 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 DHX15O43143 795 aaKnown RBP20.08■□□□□ 0.81
FOXN3-204ENST00000553840 GHRP10912 638 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 POU3F3P20264 500 aaPredicted RBP20.08■□□□□ 0.81
FOXN3-204ENST00000553840 MRPS6P82932 125 aaKnown RBP20.08■□□□□ 0.81
FOXN3-204ENST00000553840 MKRN4PQ13434 485 aaPredicted RBP20.08■□□□□ 0.81
FOXN3-204ENST00000553840 ANKRD1Q15327 319 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 GALNT17Q6IS24 598 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 PDXDC2PQ6P474 469 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 TGS1Q96RS0 853 aaKnown RBP20.08■□□□□ 0.81
FOXN3-204ENST00000553840 FAM49AQ9H0Q0 323 aaPredicted RBP20.08■□□□□ 0.81
FOXN3-204ENST00000553840 SLKQ9H2G2 1235 aaPredicted RBP20.08■□□□□ 0.81
FOXN3-204ENST00000553840 THEGQ9P2T0 379 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 CDY2AQ9Y6F7 541 aa20.08■□□□□ 0.81
FOXN3-204ENST00000553840 EYSQ5T1H1 3165 aa20.07■□□□□ 0.8
FOXN3-204ENST00000553840 PSAPP07602 524 aa20.07■□□□□ 0.8
FOXN3-204ENST00000553840 XBP1P17861 261 aa20.07■□□□□ 0.8
FOXN3-204ENST00000553840 MGAT3Q09327 533 aa20.07■□□□□ 0.8
FOXN3-204ENST00000553840 SWSAP1Q6NVH7 229 aa20.07■□□□□ 0.8
FOXN3-204ENST00000553840 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms