RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 PRR19A6NJB7 356 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 ERC2O15083 957 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 KDM1AO60341 852 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 FOSL1P15407 271 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 CD40P25942 277 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 FNTBP49356 437 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 PRKCQQ04759 706 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 GALEQ14376 348 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 EPHA7Q15375 998 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 RSPO4Q2I0M5 234 aaPredicted RBP5.02□□□□□ -1.61
TDP1-207ENST00000553617 HSF5Q4G112 596 aaPredicted RBP5.02□□□□□ -1.61
TDP1-207ENST00000553617 KSR2Q6VAB6 950 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 KCTD1Q719H9 257 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 ZZZ3Q8IYH5 903 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 FAM9AQ8IZU1 332 aaPredicted RBP5.02□□□□□ -1.61
TDP1-207ENST00000553617 TIFAQ96CG3 184 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 ASIC4Q96FT7 647 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 ACAP3Q96P50 834 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 SARGQ9BW04 601 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 CD244Q9BZW8 370 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 ZNF277Q9NRM2 450 aaPredicted RBP5.02□□□□□ -1.61
TDP1-207ENST00000553617 PIM2Q9P1W9 311 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 USP36Q9P275 1121 aaKnown RBP5.02□□□□□ -1.61
TDP1-207ENST00000553617 TELO2Q9Y4R8 837 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 COMMD10Q9Y6G5 202 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 ATP23Q9Y6H3 246 aa5.02□□□□□ -1.61
TDP1-207ENST00000553617 RASSF10A6NK89 507 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 XPOTO43592 962 aaKnown RBP5.01□□□□□ -1.61
TDP1-207ENST00000553617 TADA3O75528 432 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 C4BPAP04003 597 aaKnown RBP5.01□□□□□ -1.61
TDP1-207ENST00000553617 H2AFB1P0C5Y9 115 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 H2AFB2P0C5Z0 115 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 ZGLP1P0C6A0 271 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 MSL3P1P0C860 447 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 SLC6A11P48066 632 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 DUSP4Q13115 394 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 VPS72Q15906 364 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 RRP12Q5JTH9 1297 aaKnown RBP5.01□□□□□ -1.61
TDP1-207ENST00000553617 NKAPLQ5M9Q1 402 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 CATSPEREQ5SY80 951 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 EFCAB2Q5VUJ9 269 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 PPP4R4Q6NUP7 873 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 AMOTL1Q8IY63 956 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 LZTR1Q8N653 840 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 SSH1Q8WYL5 1049 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 JADE3Q92613 823 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 ZNF496Q96IT1 587 aaPredicted RBP5.01□□□□□ -1.61
TDP1-207ENST00000553617 MPHOSPH6Q99547 160 aaKnown RBP5.01□□□□□ -1.61
TDP1-207ENST00000553617 SLC12A5Q9H2X9 1139 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 VAV3Q9UKW4 847 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 INVSQ9Y283 1065 aa5.01□□□□□ -1.61
TDP1-207ENST00000553617 FAM90A27PA6NNH2 459 aa5□□□□□ -1.61
TDP1-207ENST00000553617 NOTOA8MTQ0 251 aa5□□□□□ -1.61
TDP1-207ENST00000553617 KRIT1O00522 736 aa5□□□□□ -1.61
TDP1-207ENST00000553617 USP2O75604 605 aaPredicted RBP5□□□□□ -1.61
TDP1-207ENST00000553617 IL33O95760 270 aa5□□□□□ -1.61
TDP1-207ENST00000553617 TMEM253P0C7T8 217 aa5□□□□□ -1.61
TDP1-207ENST00000553617 AGXTP21549 392 aa5□□□□□ -1.61
TDP1-207ENST00000553617 ENPP1P22413 925 aa5□□□□□ -1.61
TDP1-207ENST00000553617 AKAP5P24588 427 aa5□□□□□ -1.61
TDP1-207ENST00000553617 GJA4P35212 333 aa5□□□□□ -1.61
TDP1-207ENST00000553617 MTNR1BP49286 362 aa5□□□□□ -1.61
TDP1-207ENST00000553617 MANFP55145 182 aaKnown RBP5□□□□□ -1.61
TDP1-207ENST00000553617 RTP1P59025 263 aa5□□□□□ -1.61
TDP1-207ENST00000553617 MVKQ03426 396 aa5□□□□□ -1.61
TDP1-207ENST00000553617 GRM3Q14832 879 aa5□□□□□ -1.61
TDP1-207ENST00000553617 FSCN1Q16658 493 aaKnown RBP5□□□□□ -1.61
TDP1-207ENST00000553617 AOC3Q16853 763 aa5□□□□□ -1.61
TDP1-207ENST00000553617 KCNK18Q7Z418 384 aa5□□□□□ -1.61
TDP1-207ENST00000553617 CXorf67Q86X51 503 aaPredicted RBP5□□□□□ -1.61
TDP1-207ENST00000553617 PJA1Q8NG27 643 aa5□□□□□ -1.61
TDP1-207ENST00000553617 RTF1Q92541 710 aaKnown RBP5□□□□□ -1.61
TDP1-207ENST00000553617 SMOC1Q9H4F8 434 aa5□□□□□ -1.61
TDP1-207ENST00000553617 SP110Q9HB58 689 aa5□□□□□ -1.61
TDP1-207ENST00000553617 RC3H2Q9HBD1 1191 aaKnown RBP5□□□□□ -1.61
TDP1-207ENST00000553617 NMRK2Q9NPI5 230 aa5□□□□□ -1.61
TDP1-207ENST00000553617 LMCD1Q9NZU5 365 aa5□□□□□ -1.61
TDP1-207ENST00000553617 IMPACTQ9P2X3 320 aa5□□□□□ -1.61
TDP1-207ENST00000553617 DDX20Q9UHI6 824 aaKnown RBP5□□□□□ -1.61
TDP1-207ENST00000553617 ACSL6Q9UKU0 697 aa5□□□□□ -1.61
TDP1-207ENST00000553617 SLC27A2O14975 620 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 BUB1BO60566 1050 aaPredicted RBP4.99□□□□□ -1.61
TDP1-207ENST00000553617 LDHAP00338 332 aaKnown RBP4.99□□□□□ -1.61
TDP1-207ENST00000553617 NTRK1P04629 796 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 GLI4P10075 376 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 PTPN1P18031 435 aaKnown RBP4.99□□□□□ -1.61
TDP1-207ENST00000553617 HOXA10P31260 410 aaPredicted RBP4.99□□□□□ -1.61
TDP1-207ENST00000553617 TMEM132BQ14DG7 1078 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 CHRNA2Q15822 529 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 MSMPQ1L6U9 139 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 RALGPS1Q5JS13 557 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 STEAP3Q658P3 488 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.99□□□□□ -1.61
TDP1-207ENST00000553617 SLC51AQ86UW1 340 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 WFDC3Q8IUB2 231 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 ANKS4BQ8N8V4 417 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 SLC35G2Q8TBE7 412 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 PHOSPHO1Q8TCT1 267 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 TGFBRAP1Q8WUH2 860 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 MISP3Q96FF7 219 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms