RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 REXO1Q8N1G1 1221 aaKnown RBP18.1■□□□□ 0.49
CDK4-215ENST00000553237 ARNTL2Q8WYA1 636 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 SEPT8Q92599 483 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 ZBTB10Q96DT7 871 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 RNF26Q9BY78 433 aaPredicted RBP18.1■□□□□ 0.49
CDK4-215ENST00000553237 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 AZI2Q9H6S1 392 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 VPS54Q9P1Q0 977 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 EYSQ5T1H1 3165 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 INSRRP14616 1297 aa18.09■□□□□ 0.49
CDK4-215ENST00000553237 STK3Q13188 491 aa18.09■□□□□ 0.49
CDK4-215ENST00000553237 MARCH8Q5T0T0 291 aa18.09■□□□□ 0.49
CDK4-215ENST00000553237 NIPA1Q7RTP0 329 aa18.09■□□□□ 0.49
CDK4-215ENST00000553237 MICALL1Q8N3F8 863 aa18.09■□□□□ 0.49
CDK4-215ENST00000553237 PDRG1Q9NUG6 133 aa18.09■□□□□ 0.49
CDK4-215ENST00000553237 TUBE1Q9UJT0 475 aa18.09■□□□□ 0.49
CDK4-215ENST00000553237 TRPC6Q9Y210 931 aa18.09■□□□□ 0.49
CDK4-215ENST00000553237 GJB5O95377 273 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 CCNE2O96020 404 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 CHRNA1P02708 482 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 CYP3A4P08684 503 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 STAT5BP51692 787 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 SSRP1Q08945 709 aaKnown RBP18.08■□□□□ 0.48
CDK4-215ENST00000553237 PLCB4Q15147 1175 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 FAM26DQ5JW98 314 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 TAF2Q6P1X5 1199 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 MYOCDQ8IZQ8 938 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 DNAJB3Q8WWF6 145 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 CRYGNQ8WXF5 182 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 ZNF274Q96GC6 653 aaPredicted RBP18.08■□□□□ 0.48
CDK4-215ENST00000553237 RAD9AQ99638 391 aa18.08■□□□□ 0.48
CDK4-215ENST00000553237 COL25A1Q9BXS0 654 aaPredicted RBP18.08■□□□□ 0.48
CDK4-215ENST00000553237 UNC80Q8N2C7 3258 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 IGLV3-22A0A075B6J6 115 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 MBLAC1A4D2B0 266 aaPredicted RBP18.07■□□□□ 0.48
CDK4-215ENST00000553237 AMHP03971 560 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 NLRP5P59047 1200 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 MCTP2Q6DN12 878 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 PLPPR4Q7Z2D5 763 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 CCDC148Q8NFR7 591 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 BICD2Q8TD16 824 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 TRAPPC12Q8WVT3 735 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 FAM49AQ9H0Q0 323 aaPredicted RBP18.07■□□□□ 0.48
CDK4-215ENST00000553237 PTPRSQ13332 1948 aa18.07■□□□□ 0.48
CDK4-215ENST00000553237 KAT6AQ92794 2004 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 RRN3P2A6NIE6 340 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 IPO5O00410 1097 aaKnown RBP18.06■□□□□ 0.48
CDK4-215ENST00000553237 CPLX1O14810 134 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 BACH1O14867 736 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 DHX15O43143 795 aaKnown RBP18.06■□□□□ 0.48
CDK4-215ENST00000553237 ATG7O95352 703 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 GHRP10912 638 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 MKRN4PQ13434 485 aaPredicted RBP18.06■□□□□ 0.48
CDK4-215ENST00000553237 PRR16Q569H4 304 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 KRT40Q6A162 431 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 ABHD15Q6UXT9 468 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 RPAINQ86UA6 219 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 RSPH3Q86UC2 560 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 TRIM22Q8IYM9 498 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 ZNF577Q9BSK1 485 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 IFIH1Q9BYX4 1025 aaKnown RBP18.06■□□□□ 0.48
CDK4-215ENST00000553237 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 PRUNE2Q8WUY3 3088 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 CHD7Q9P2D1 2997 aa18.06■□□□□ 0.48
CDK4-215ENST00000553237 POTEB3A0JP26 581 aa18.05■□□□□ 0.48
CDK4-215ENST00000553237 UPP2O95045 317 aa18.05■□□□□ 0.48
CDK4-215ENST00000553237 MGAT3Q09327 533 aa18.05■□□□□ 0.48
CDK4-215ENST00000553237 POTEBQ6S5H4 581 aa18.05■□□□□ 0.48
CDK4-215ENST00000553237 SH3GLB2Q9NR46 395 aa18.05■□□□□ 0.48
CDK4-215ENST00000553237 CDY2AQ9Y6F7 541 aa18.05■□□□□ 0.48
CDK4-215ENST00000553237 CUL9Q8IWT3 2517 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 IGKV6D-21A0A0A0MT36 114 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.04■□□□□ 0.48
CDK4-215ENST00000553237 GTPBP6O43824 516 aaPredicted RBP18.04■□□□□ 0.48
CDK4-215ENST00000553237 EDIL3O43854 480 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 DTNBO60941 627 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 LPIN1Q14693 890 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 FAM160B1Q5W0V3 765 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 SWSAP1Q6NVH7 229 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 MIS18BP1Q6P0N0 1132 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 PDXDC2PQ6P474 469 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 CCDC60Q8IWA6 550 aaPredicted RBP18.04■□□□□ 0.48
CDK4-215ENST00000553237 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
CDK4-215ENST00000553237 AIFM3Q96NN9 605 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 ZNF302Q9NR11 478 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 INSL6Q9Y581 213 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 MTCH2Q9Y6C9 303 aa18.04■□□□□ 0.48
CDK4-215ENST00000553237 LINC01553A4QN01 128 aa18.03■□□□□ 0.48
CDK4-215ENST00000553237 DEXIO95424 95 aa18.03■□□□□ 0.48
CDK4-215ENST00000553237 CIITAP33076 1130 aa18.03■□□□□ 0.48
CDK4-215ENST00000553237 MRPS6P82932 125 aaKnown RBP18.03■□□□□ 0.48
CDK4-215ENST00000553237 SETQ01105 290 aaPredicted RBP18.03■□□□□ 0.48
CDK4-215ENST00000553237 TMEM62Q0P6H9 643 aa18.03■□□□□ 0.48
CDK4-215ENST00000553237 GRB10Q13322 594 aa18.03■□□□□ 0.48
CDK4-215ENST00000553237 CPLX2Q6PUV4 134 aaKnown RBP18.03■□□□□ 0.48
CDK4-215ENST00000553237 TRMT1LQ7Z2T5 733 aaKnown RBP18.03■□□□□ 0.48
CDK4-215ENST00000553237 APBB2Q92870 758 aa18.03■□□□□ 0.48
CDK4-215ENST00000553237 TBC1D22BQ9NU19 505 aa18.03■□□□□ 0.48
CDK4-215ENST00000553237 PCDHA2Q9Y5H9 948 aa18.03■□□□□ 0.48
CDK4-215ENST00000553237 SLC26A2P50443 739 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms