RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 GTF2IRD2Q86UP8 949 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 MIB1Q86YT6 1006 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 WDR75Q8IWA0 830 aaKnown RBP4.19□□□□□ -1.74
CPNE8-208ENST00000551855 TRIM59Q8IWR1 403 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 TMEM145Q8NBT3 493 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 IGDCC4Q8TDY8 1250 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 COG1Q8WTW3 980 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 DPF3Q92784 378 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 IPO9Q96P70 1041 aaKnown RBP4.19□□□□□ -1.74
CPNE8-208ENST00000551855 DEF6Q9H4E7 631 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.19□□□□□ -1.74
CPNE8-208ENST00000551855 CGGBP1Q9UFW8 167 aaPredicted RBP4.19□□□□□ -1.74
CPNE8-208ENST00000551855 SFMBT1Q9UHJ3 866 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 EMC9Q9Y3B6 208 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 PCDHA9Q9Y5H5 950 aa4.19□□□□□ -1.74
CPNE8-208ENST00000551855 C2orf71A6NGG8 1288 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 NOP56O00567 594 aaKnown RBP4.18□□□□□ -1.74
CPNE8-208ENST00000551855 OPA1O60313 960 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 PPM1BO75688 479 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 ALDH1L1O75891 902 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 JMJD7P0C870 316 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 ZNF28P17035 718 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 SOX5P35711 763 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 ZNF143P52747 638 aaPredicted RBP4.18□□□□□ -1.74
CPNE8-208ENST00000551855 SUMO1P63165 101 aaKnown RBP4.18□□□□□ -1.74
CPNE8-208ENST00000551855 MTMR1Q13613 665 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 TAF7LQ5H9L4 462 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 ABHD17CQ6PCB6 329 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 USP53Q70EK8 1073 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 NXPE1Q8N323 547 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 TTLL6Q8N841 843 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 CDK5RAP1Q96SZ6 601 aaKnown RBP4.18□□□□□ -1.74
CPNE8-208ENST00000551855 MRPL4Q9BYD3 311 aaKnown RBP4.18□□□□□ -1.74
CPNE8-208ENST00000551855 ASPSCR1Q9BZE9 553 aa4.18□□□□□ -1.74
CPNE8-208ENST00000551855 TMEFF2Q9UIK5 374 aaPredicted RBP4.18□□□□□ -1.74
CPNE8-208ENST00000551855 CCDC163A0A0D9SF12 145 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 PEX14O75381 377 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 SNRPB2P08579 225 aaKnown RBP4.17□□□□□ -1.74
CPNE8-208ENST00000551855 KCNA6P17658 529 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 PAMP19021 973 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 SEPHS1P49903 392 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 GFRA1P56159 465 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 EXOSC10Q01780 885 aaKnown RBP4.17□□□□□ -1.74
CPNE8-208ENST00000551855 TTF1Q15361 905 aaPredicted RBP4.17□□□□□ -1.74
CPNE8-208ENST00000551855 SURF1Q15526 300 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 IGFL4Q6B9Z1 124 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 DDX46Q7L014 1031 aaKnown RBP4.17□□□□□ -1.74
CPNE8-208ENST00000551855 CIR1Q86X95 450 aaPredicted RBP4.17□□□□□ -1.74
CPNE8-208ENST00000551855 CERS3Q8IU89 383 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 ARHGEF39Q8N4T4 335 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 C1orf159Q96HA4 380 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 ZSWIM3Q96MP5 696 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 GBP3Q9H0R5 595 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 GPRC5CQ9NQ84 441 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 TYW1Q9NV66 732 aaKnown RBP4.17□□□□□ -1.74
CPNE8-208ENST00000551855 WHRNQ9P202 907 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 MAPRE3Q9UPY8 281 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 PCDHA8Q9Y5H6 950 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 BACE2Q9Y5Z0 518 aa4.17□□□□□ -1.74
CPNE8-208ENST00000551855 PHLDB1Q86UU1 1377 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 NPHP3-ACAD11A0A0J9YXS1 232 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 SHTN1A0MZ66 631 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 C9orf118A6NHY6 69 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 ZNF891A8MT65 544 aaPredicted RBP4.16□□□□□ -1.74
CPNE8-208ENST00000551855 PATE3B3GLJ2 98 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 M0R2C6 588 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 MSCO60682 206 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 CRTAMO95727 393 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 NAT2P11245 290 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 LCP1P13796 627 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 MLLT6P55198 1093 aaPredicted RBP4.16□□□□□ -1.74
CPNE8-208ENST00000551855 PPP2CBP62714 309 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 PPP2CAP67775 309 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 TMPRSS15P98073 1019 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 ITKQ08881 620 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 SCRN1Q12765 414 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 CR1LQ2VPA4 569 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 HSP90AB2PQ58FF8 381 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 TRIM61Q5EBN2 209 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 ZC3H12BQ5HYM0 836 aaKnown RBP4.16□□□□□ -1.74
CPNE8-208ENST00000551855 PRAMEF18Q5VWM3 479 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 CDCA2Q69YH5 1023 aaPredicted RBP4.16□□□□□ -1.74
CPNE8-208ENST00000551855 C14orf80Q86SX3 495 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 KREMEN2Q8NCW0 462 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 GSTCDQ8NEC7 633 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 MTMR8Q96EF0 704 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 CEP89Q96ST8 783 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 PCDH18Q9HCL0 1135 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 MARCH2Q9P0N8 246 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 CLEC1BQ9P126 229 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 MAGEC2Q9UBF1 373 aaPredicted RBP4.16□□□□□ -1.74
CPNE8-208ENST00000551855 MCM8Q9UJA3 840 aa4.16□□□□□ -1.74
CPNE8-208ENST00000551855 TCRBV16S1A1N1A0A5B0 115 aa4.15□□□□□ -1.75
CPNE8-208ENST00000551855 NPIPB8E9PQR5 432 aa4.15□□□□□ -1.75
CPNE8-208ENST00000551855 NEMP1O14524 444 aa4.15□□□□□ -1.75
CPNE8-208ENST00000551855 PRPF3O43395 683 aaKnown RBP4.15□□□□□ -1.75
CPNE8-208ENST00000551855 NPHS1O60500 1241 aa4.15□□□□□ -1.75
CPNE8-208ENST00000551855 CYP1A1P04798 512 aaPredicted RBP4.15□□□□□ -1.75
CPNE8-208ENST00000551855 IL13P35225 146 aa4.15□□□□□ -1.75
CPNE8-208ENST00000551855 RAB27AP51159 221 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms