RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 MTMR8Q96EF0 704 aa6.64□□□□□ -1.35
LIMA1-205ENST00000550592 TOMM22Q9NS69 142 aa6.64□□□□□ -1.35
LIMA1-205ENST00000550592 RIC8BQ9NVN3 520 aa6.64□□□□□ -1.35
LIMA1-205ENST00000550592 HSPBP1Q9NZL4 362 aa6.64□□□□□ -1.35
LIMA1-205ENST00000550592 SPEF1Q9Y4P9 236 aa6.64□□□□□ -1.35
LIMA1-205ENST00000550592 HRKO00198 91 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 GABRDO14764 452 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 FAHP16930 419 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 FNTBP49356 437 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 ERVK-21P61565 698 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 GRIN1Q05586 938 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 TTF1Q15361 905 aaPredicted RBP6.63□□□□□ -1.35
LIMA1-205ENST00000550592 INAVAQ3KP66 663 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 PLEKHN1Q494U1 663 aaPredicted RBP6.63□□□□□ -1.35
LIMA1-205ENST00000550592 PAN2Q504Q3 1202 aaKnown RBP6.63□□□□□ -1.35
LIMA1-205ENST00000550592 CATSPEREQ5SY80 951 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 HDGFL2Q7Z4V5 671 aaPredicted RBP6.63□□□□□ -1.35
LIMA1-205ENST00000550592 MIB1Q86YT6 1006 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 ZZZ3Q8IYH5 903 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 AHCYL2Q96HN2 611 aaKnown RBP6.63□□□□□ -1.35
LIMA1-205ENST00000550592 C16orf92Q96LL3 132 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 ZMAT4Q9H898 229 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 TRHDEQ9UKU6 1024 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 G3BP2Q9UN86 482 aaKnown RBP6.63□□□□□ -1.35
LIMA1-205ENST00000550592 HCFC2Q9Y5Z7 792 aa6.63□□□□□ -1.35
LIMA1-205ENST00000550592 RASSF10A6NK89 507 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 BIN1O00499 593 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 FOXP2O15409 715 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 MARCH6O60337 910 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 PARNO95453 639 aaKnown RBP6.62□□□□□ -1.35
LIMA1-205ENST00000550592 PDE6BP35913 854 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 EPHB1P54762 984 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 EPHA7Q15375 998 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 ESRP1Q6NXG1 681 aaKnown RBP6.62□□□□□ -1.35
LIMA1-205ENST00000550592 ZC3H14Q6PJT7 736 aaKnown RBP6.62□□□□□ -1.35
LIMA1-205ENST00000550592 ZSWIM9Q86XI8 627 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 FAM126BQ8IXS8 530 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 CBARPQ8N350 705 aaPredicted RBP6.62□□□□□ -1.35
LIMA1-205ENST00000550592 JDP2Q8WYK2 163 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 ZNF552Q9H707 407 aaPredicted RBP6.62□□□□□ -1.35
LIMA1-205ENST00000550592 DTLQ9NZJ0 730 aa6.62□□□□□ -1.35
LIMA1-205ENST00000550592 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 FBXO21O94952 628 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 LRG1P02750 347 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 CD40P25942 277 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 ADCY1Q08828 1119 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 KCNMB1Q16558 191 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 RGL3Q3MIN7 710 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 FRMD7Q6ZUT3 714 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 NME9Q86XW9 330 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 TOE1Q96GM8 510 aaKnown RBP6.61□□□□□ -1.35
LIMA1-205ENST00000550592 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 ZDHHC5Q9C0B5 715 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 NOC2LQ9Y3T9 749 aaKnown RBP6.61□□□□□ -1.35
LIMA1-205ENST00000550592 EID1Q9Y6B2 187 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 SCRIBQ14160 1630 aa6.61□□□□□ -1.35
LIMA1-205ENST00000550592 TNKSO95271 1327 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.6□□□□□ -1.35
LIMA1-205ENST00000550592 PRAMEF25A6NGN4 478 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 PAPLNO95428 1278 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 NEK2P51955 445 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 MCL1Q07820 350 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 KLF1Q13351 362 aaPredicted RBP6.6□□□□□ -1.35
LIMA1-205ENST00000550592 OLFML2BQ68BL8 750 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 AMIGO3Q86WK7 504 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 ASB15Q8WXK1 588 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 YIPF4Q9BSR8 244 aa6.6□□□□□ -1.35
LIMA1-205ENST00000550592 TOPORSQ9NS56 1045 aaPredicted RBP6.6□□□□□ -1.35
LIMA1-205ENST00000550592 USP36Q9P275 1121 aaKnown RBP6.6□□□□□ -1.35
LIMA1-205ENST00000550592 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.59□□□□□ -1.35
LIMA1-205ENST00000550592 GOLGA6L22H0YM25 854 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 MMEP08473 750 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 ITGB5P18084 799 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 FBLN1P23142 703 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 DBPQ10586 325 aaPredicted RBP6.59□□□□□ -1.35
LIMA1-205ENST00000550592 CYB5RLQ6IPT4 315 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 TEPPQ6URK8 271 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 ETV3LQ6ZN32 361 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 RAVER1Q8IY67 606 aaKnown RBP6.59□□□□□ -1.35
LIMA1-205ENST00000550592 CPA5Q8WXQ8 436 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 ALG3Q92685 438 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 CHMP4CQ96CF2 233 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 FOXRED1Q96CU9 486 aaPredicted RBP6.59□□□□□ -1.35
LIMA1-205ENST00000550592 ZNF496Q96IT1 587 aaPredicted RBP6.59□□□□□ -1.35
LIMA1-205ENST00000550592 GBP4Q96PP9 640 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 MS4A5Q9H3V2 200 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 BCAS3Q9H6U6 928 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 NGRNQ9NPE2 291 aaKnown RBP6.59□□□□□ -1.35
LIMA1-205ENST00000550592 C14orf119Q9NWQ9 140 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 BTBD7Q9P203 1132 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 CHPF2Q9P2E5 772 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 ASB1Q9Y576 335 aa6.59□□□□□ -1.35
LIMA1-205ENST00000550592 IRS2Q9Y4H2 1338 aa6.58□□□□□ -1.36
LIMA1-205ENST00000550592 ZNF503-AS2A6NEH8 195 aa6.58□□□□□ -1.36
LIMA1-205ENST00000550592 AOAHP28039 575 aa6.58□□□□□ -1.36
LIMA1-205ENST00000550592 VIPR1P32241 457 aa6.58□□□□□ -1.36
LIMA1-205ENST00000550592 PDCD1Q15116 288 aa6.58□□□□□ -1.36
LIMA1-205ENST00000550592 NFE2Q16621 373 aaPredicted RBP6.58□□□□□ -1.36
LIMA1-205ENST00000550592 CR1LQ2VPA4 569 aa6.58□□□□□ -1.36
LIMA1-205ENST00000550592 TMC6Q7Z403 805 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms