RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 LRRC26Q2I0M4 334 aa19.37■□□□□ 0.69
BRF1-217ENST00000550375 ZNF396Q96N95 335 aaPredicted RBP19.37■□□□□ 0.69
BRF1-217ENST00000550375 USP28Q96RU2 1077 aa19.37■□□□□ 0.69
BRF1-217ENST00000550375 KATNAL1Q9BW62 490 aa19.37■□□□□ 0.69
BRF1-217ENST00000550375 CEP131Q9UPN4 1083 aa19.37■□□□□ 0.69
BRF1-217ENST00000550375 HAS3O00219 553 aa19.36■□□□□ 0.69
BRF1-217ENST00000550375 IL17AQ16552 155 aa19.36■□□□□ 0.69
BRF1-217ENST00000550375 TMEM266Q2M3C6 531 aa19.36■□□□□ 0.69
BRF1-217ENST00000550375 PDXDC2PQ6P474 469 aa19.36■□□□□ 0.69
BRF1-217ENST00000550375 TRMT1LQ7Z2T5 733 aaKnown RBP19.36■□□□□ 0.69
BRF1-217ENST00000550375 RDM1Q8NG50 284 aa19.36■□□□□ 0.69
BRF1-217ENST00000550375 ERAP1Q9NZ08 941 aa19.36■□□□□ 0.69
BRF1-217ENST00000550375 ATP11BQ9Y2G3 1177 aa19.36■□□□□ 0.69
BRF1-217ENST00000550375 TRIP12Q14669 1992 aaPredicted RBP19.35■□□□□ 0.69
BRF1-217ENST00000550375 ARVCFO00192 962 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 BMP15O95972 392 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 PRPHP41219 470 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 RTP1P59025 263 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 NUCB2P80303 420 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 EPHA7Q15375 998 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 UGCGQ16739 394 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 TRIM60Q495X7 471 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 DTHD1Q6ZMT9 781 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 PLPPR4Q7Z2D5 763 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 CKAP2LQ8IYA6 745 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 C7orf31Q8N865 590 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 BANK1Q8NDB2 785 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 RNPEPQ9H4A4 650 aa19.35■□□□□ 0.69
BRF1-217ENST00000550375 VWA3AA6NCI4 1184 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 PQBP1O60828 265 aaKnown RBP19.34■□□□□ 0.69
BRF1-217ENST00000550375 DNM1Q05193 864 aaKnown RBP19.34■□□□□ 0.69
BRF1-217ENST00000550375 PLCB4Q15147 1175 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 PTPAQ15257 358 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 AFAP1L1Q8TED9 768 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 CHAMP1Q96JM3 812 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 IPO9Q96P70 1041 aaKnown RBP19.34■□□□□ 0.69
BRF1-217ENST00000550375 HTATIP2Q9BUP3 242 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 RGL1Q9NZL6 768 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 HDAC6Q9UBN7 1215 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 LRWD1Q9UFC0 647 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 TRPC6Q9Y210 931 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 MAFBQ9Y5Q3 323 aaPredicted RBP19.34■□□□□ 0.69
BRF1-217ENST00000550375 TCHHQ07283 1943 aa19.34■□□□□ 0.69
BRF1-217ENST00000550375 SMIM10L2AP0DMW4 78 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 SMIM10L2BP0DMW5 78 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 MARCKSP29966 332 aaPredicted RBP19.33■□□□□ 0.69
BRF1-217ENST00000550375 CDK7P50613 346 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 FXR2P51116 673 aaKnown RBP eCLIP19.33■□□□□ 0.69
BRF1-217ENST00000550375 CYP4A11Q02928 519 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 SNX17Q15036 470 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 STK38Q15208 465 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 NFRKBQ6P4R8 1299 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 SLC43A3Q8NBI5 491 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 DYDC2Q96IM9 177 aa19.33■□□□□ 0.69
BRF1-217ENST00000550375 EIF2AK1Q9BQI3 630 aaKnown RBP19.33■□□□□ 0.69
BRF1-217ENST00000550375 IGSF9BQ9UPX0 1349 aa19.33■□□□□ 0.68
BRF1-217ENST00000550375 POTEB3A0JP26 581 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 ATP4AP20648 1035 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 TLE2Q04725 743 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 CTTNQ14247 550 aaKnown RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 ARL6IP4Q66PJ3 421 aaKnown RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 POTEBQ6S5H4 581 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 DPF3Q92784 378 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 ATP6V0A1Q93050 837 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 PP2D1A8MPX8 630 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 ZNF862O60290 1169 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 P4HBP07237 508 aaKnown RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 QARSP47897 775 aaKnown RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 NASPP49321 788 aaPredicted RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 SLC26A2P50443 739 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 PSMC5P62195 406 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 PRKCEQ02156 737 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 GRIN1Q05586 938 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 PDIA5Q14554 519 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 SLC39A14Q15043 492 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 PRPF38BQ5VTL8 546 aaKnown RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 C1orf53Q5VUE5 145 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 GDF6Q6KF10 455 aaPredicted RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 TPH2Q8IWU9 490 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 IGSF22Q8N9C0 903 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 LXNQ9BS40 222 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 RAB34Q9BZG1 259 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 TRPV6Q9H1D0 765 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 TRMT13Q9NUP7 481 aaKnown RBP19.32■□□□□ 0.68
BRF1-217ENST00000550375 SETD4Q9NVD3 440 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 GTF2IRD1Q9UHL9 959 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 ATP6V1DQ9Y5K8 247 aa19.32■□□□□ 0.68
BRF1-217ENST00000550375 MROH7Q68CQ1 1323 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 DNAH12Q6ZR08 3092 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 C17orf102A2RUQ5 167 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 DCDC2CA8MYV0 355 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 SLITRK3O94933 977 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 INSRRP14616 1297 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 CDC25AP30304 524 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 IGBP1P78318 339 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 ZNF200P98182 395 aaPredicted RBP19.31■□□□□ 0.68
BRF1-217ENST00000550375 PTPN11Q06124 597 aaPredicted RBP19.31■□□□□ 0.68
BRF1-217ENST00000550375 PPFIA1Q13136 1202 aa19.31■□□□□ 0.68
BRF1-217ENST00000550375 HIC1Q14526 733 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms