RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ITIH6Q6UXX5 1313 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 BMP3P12645 472 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 KRT83P78385 493 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 HLTFQ14527 1009 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 SPICE1Q8N0Z3 855 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 UHMK1Q8TAS1 419 aaKnown RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 FAM76AQ8TAV0 307 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 BCAS4Q8TDM0 211 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 CUEDC2Q9H467 287 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 MAGEF1Q9HAY2 307 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 CHMP2AO43633 222 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.45
LINC00661-204ENST00000549354 CDC37Q16543 378 aaPredicted RBP12.21□□□□□ -0.45
LINC00661-204ENST00000549354 MAP9Q49MG5 647 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 CRYGNQ8WXF5 182 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 MBOAT7Q96N66 472 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 NAP1L4Q99733 375 aaKnown RBP12.21□□□□□ -0.45
LINC00661-204ENST00000549354 PSTPIP2Q9H939 334 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 AGPSO00116 658 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 KRT14P02533 472 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 CAP2P40123 477 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 R3HDM1Q15032 1099 aaKnown RBP12.21□□□□□ -0.45
LINC00661-204ENST00000549354 ZYXQ15942 572 aaKnown RBP12.21□□□□□ -0.45
LINC00661-204ENST00000549354 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 DCAF17Q5H9S7 520 aaPredicted RBP12.21□□□□□ -0.45
LINC00661-204ENST00000549354 SYDE2Q5VT97 1194 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 KCNK18Q7Z418 384 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 TMEM39BQ9GZU3 492 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 MED4Q9NPJ6 270 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 GINM1Q9NU53 330 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 CAPN11Q9UMQ6 739 aa12.21□□□□□ -0.45
LINC00661-204ENST00000549354 CYP3A7-CYP3A51PA0A087WV96 503 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 SLC37A4O43826 429 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 GCFC2P16383 781 aaKnown RBP12.21□□□□□ -0.46
LINC00661-204ENST00000549354 CYP3A7P24462 503 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 PRELPP51888 382 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 POLR2FP61218 127 aaKnown RBP12.21□□□□□ -0.46
LINC00661-204ENST00000549354 PDCLQ13371 301 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 PDIA5Q14554 519 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 CCNI2Q6ZMN8 369 aaPredicted RBP12.21□□□□□ -0.46
LINC00661-204ENST00000549354 ARL8AQ96BM9 186 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 TEPSINQ96N21 525 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 FGFBP2Q9BYJ0 223 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.46
LINC00661-204ENST00000549354 PHF20L1A8MW92 1017 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 E9PMD0 336 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 GNGT1P63211 74 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 EHHADHQ08426 723 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 MOXD1Q6UVY6 613 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 HOMEZQ8IX15 550 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 RUFY1Q96T51 708 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
LINC00661-204ENST00000549354 AMNQ9BXJ7 453 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 PCDHA1Q9Y5I3 950 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 LRRC53A6NM62 1247 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 MAGEA1P43355 309 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 DNM2P50570 870 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 USP11P51784 963 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 GTF2A1P52655 376 aaPredicted RBP12.2□□□□□ -0.46
LINC00661-204ENST00000549354 AP3B2Q13367 1082 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 TRIM14Q14142 442 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 WDR93Q6P2C0 686 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 ZNF507Q8TCN5 953 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 DNAJC7Q99615 494 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 MYO1AQ9UBC5 1043 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 ADAMTS1Q9UHI8 967 aa12.2□□□□□ -0.46
LINC00661-204ENST00000549354 MEIS2O14770 477 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 PRPF6O94906 941 aaKnown RBP12.19□□□□□ -0.46
LINC00661-204ENST00000549354 ACTN1P12814 892 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 KIAA1755Q5JYT7 1200 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 FBXW10Q5XX13 1052 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 TTI2Q6NXR4 508 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 CDAN1Q8IWY9 1227 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 CCDC47Q96A33 483 aaKnown RBP12.19□□□□□ -0.46
LINC00661-204ENST00000549354 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
LINC00661-204ENST00000549354 GOPCQ9HD26 462 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 SALL4Q9UJQ4 1053 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 KLRC4O43908 158 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 TSEN2Q8NCE0 465 aaKnown RBP12.19□□□□□ -0.46
LINC00661-204ENST00000549354 VEZTQ9HBM0 779 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 SHTN1A0MZ66 631 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 CLIC2O15247 247 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 SLC26A4O43511 780 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 PPFIA4O75335 1185 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 TRAF1Q13077 416 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 TUBB2AQ13885 445 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 KCNB1Q14721 858 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 CALCRLQ16602 461 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 HERC4Q5GLZ8 1057 aaPredicted RBP12.19□□□□□ -0.46
LINC00661-204ENST00000549354 CCDC70Q6NSX1 233 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 ACER1Q8TDN7 264 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 P2RX5Q93086 422 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 TUBB2BQ9BVA1 445 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 PACSIN1Q9BY11 444 aa12.19□□□□□ -0.46
LINC00661-204ENST00000549354 ARHGAP20Q9P2F6 1191 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms