RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 BROXQ5VW32 411 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 BTBD8Q5XKL5 378 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 RASSF3Q86WH2 238 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 ZNF610Q8N9Z0 462 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 CEP89Q96ST8 783 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 CCDC8Q9H0W5 538 aaPredicted RBP5.6□□□□□ -1.51
PTCH1-216ENST00000548379 OR14I1A6ND48 311 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 ABLIM1O14639 778 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 ALDH1L1O75891 902 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 FAHP16930 419 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 PTX3P26022 381 aaPredicted RBP5.59□□□□□ -1.51
PTCH1-216ENST00000548379 LSP1P33241 339 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 TMEM62Q0P6H9 643 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 TTF1Q15361 905 aaPredicted RBP5.59□□□□□ -1.51
PTCH1-216ENST00000548379 EPHA7Q15375 998 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 PAN2Q504Q3 1202 aaKnown RBP5.59□□□□□ -1.51
PTCH1-216ENST00000548379 ODR4Q5SWX8 454 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 IQSEC1Q6DN90 963 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 ZSWIM9Q86XI8 627 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 PASD1Q8IV76 773 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 FAM126BQ8IXS8 530 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 PCIF1Q9H4Z3 704 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 ZNF552Q9H707 407 aaPredicted RBP5.59□□□□□ -1.51
PTCH1-216ENST00000548379 DTLQ9NZJ0 730 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 TRHDEQ9UKU6 1024 aa5.59□□□□□ -1.51
PTCH1-216ENST00000548379 IRS2Q9Y4H2 1338 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.58□□□□□ -1.52
PTCH1-216ENST00000548379 SCO2A0A1W2PP80 73 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 PARNO95453 639 aaKnown RBP5.58□□□□□ -1.52
PTCH1-216ENST00000548379 LRG1P02750 347 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 GRIN1Q05586 938 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 MCL1Q07820 350 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 ITKQ08881 620 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 MOGSQ13724 837 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 EP400NLQ6ZTU2 488 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 ZZZ3Q8IYH5 903 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 FOXRED1Q96CU9 486 aaPredicted RBP5.58□□□□□ -1.52
PTCH1-216ENST00000548379 ZDHHC5Q9C0B5 715 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 TOMM22Q9NS69 142 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 RIC8BQ9NVN3 520 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 BTBD7Q9P203 1132 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 SPEF1Q9Y4P9 236 aa5.58□□□□□ -1.52
PTCH1-216ENST00000548379 ZNF503-AS2A6NEH8 195 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 FZD9O00144 591 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 BIN1O00499 593 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 FOXP2O15409 715 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 FBXO21O94952 628 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 THBS2P35442 1172 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 NEK2P51955 445 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 EPHB1P54762 984 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 DBPQ10586 325 aaPredicted RBP5.57□□□□□ -1.52
PTCH1-216ENST00000548379 TMEM132BQ14DG7 1078 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 CR1LQ2VPA4 569 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 ZC3H14Q6PJT7 736 aaKnown RBP5.57□□□□□ -1.52
PTCH1-216ENST00000548379 HDGFL2Q7Z4V5 671 aaPredicted RBP5.57□□□□□ -1.52
PTCH1-216ENST00000548379 RTN4RL1Q86UN2 441 aaPredicted RBP5.57□□□□□ -1.52
PTCH1-216ENST00000548379 AMIGO3Q86WK7 504 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 PROSER1Q86XN7 944 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 RAVER1Q8IY67 606 aaKnown RBP5.57□□□□□ -1.52
PTCH1-216ENST00000548379 ASB15Q8WXK1 588 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 CPA5Q8WXQ8 436 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 MTMR8Q96EF0 704 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 ORAI2Q96SN7 254 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 MS4A5Q9H3V2 200 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 TOPORSQ9NS56 1045 aaPredicted RBP5.57□□□□□ -1.52
PTCH1-216ENST00000548379 USP36Q9P275 1121 aaKnown RBP5.57□□□□□ -1.52
PTCH1-216ENST00000548379 DBR1Q9UK59 544 aaKnown RBP5.57□□□□□ -1.52
PTCH1-216ENST00000548379 PLA2G2DQ9UNK4 145 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 UNC13AQ9UPW8 1703 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 CARMIL2Q6F5E8 1435 aa5.57□□□□□ -1.52
PTCH1-216ENST00000548379 TNKSO95271 1327 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 GOLGA6L22H0YM25 854 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 MPIG6BO95866 241 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 MMEP08473 750 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 CD40P25942 277 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 AOAHP28039 575 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 VIPR1P32241 457 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 PDE6BP35913 854 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 ADCY1Q08828 1119 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 KLF1Q13351 362 aaPredicted RBP5.56□□□□□ -1.52
PTCH1-216ENST00000548379 PDCD1Q15116 288 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 KCNMB1Q16558 191 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 TEPPQ6URK8 271 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 NME9Q86XW9 330 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 JDP2Q8WYK2 163 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 TOE1Q96GM8 510 aaKnown RBP5.56□□□□□ -1.52
PTCH1-216ENST00000548379 AHCYL2Q96HN2 611 aaKnown RBP5.56□□□□□ -1.52
PTCH1-216ENST00000548379 ASB1Q9Y576 335 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 EID1Q9Y6B2 187 aa5.56□□□□□ -1.52
PTCH1-216ENST00000548379 PRAMEF25A6NGN4 478 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 TRIM75PA6NK02 468 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 MARCH6O60337 910 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 ASGR2P07307 311 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 JUNBP17275 347 aaPredicted RBP5.55□□□□□ -1.52
PTCH1-216ENST00000548379 KRT85P78386 507 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 NFE2Q16621 373 aaPredicted RBP5.55□□□□□ -1.52
PTCH1-216ENST00000548379 CD276Q5ZPR3 534 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 FRMD7Q6ZUT3 714 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 LMBR1Q8WVP7 490 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 ZNF496Q96IT1 587 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms