RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 TUBE1Q9UJT0 475 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 FAM50BQ9Y247 325 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 FNDC1Q4ZHG4 1894 aaPredicted RBP13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 ADGRA3Q8IWK6 1321 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 CCDC69A6NI79 296 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 PRC1O43663 620 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 PPFIA3O75145 1194 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 RB1P06400 928 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 KIF5BP33176 963 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 IRS1P35568 1242 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 COL9A3Q14050 684 aaPredicted RBP13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 MARCH8Q5T0T0 291 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 TAF2Q6P1X5 1199 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 RBM23Q86U06 439 aaKnown RBP13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 RTN4RL1Q86UN2 441 aaPredicted RBP13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 TRAPPC12Q8WVT3 735 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 SPZ1Q9BXG8 430 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 LRRC2Q9BYS8 371 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 SMARCAD1Q9H4L7 1026 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 ERAP1Q9NZ08 941 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 PCDHA6Q9UN73 950 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 PCDHA8Q9Y5H6 950 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 RBM8AQ9Y5S9 174 aaKnown RBP13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 MUC6Q6W4X9 2439 aa13.72□□□□□ -0.21
TRAFD1-205ENST00000548277 WDR81Q562E7 1941 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 C5orf67F2Z3F1 127 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 SGSM2O43147 1006 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 MBTPS2O43462 519 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 DGKIO75912 1065 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 LINC00271P0C7V0 271 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 INSRRP14616 1297 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 DNAJB1P25685 340 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 GATMP50440 423 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 MRPS6P82932 125 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 MTMR1Q13613 665 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 XRRA1Q6P2D8 792 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 ADHFE1Q8IWW8 467 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 ZNF689Q96CS4 500 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 GPRASP2Q96D09 838 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 PGBD1Q96JS3 809 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 MUTYHQ9UIF7 546 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 PLAGL2Q9UPG8 496 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 RWDD3Q9Y3V2 267 aa13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-205ENST00000548277 C5orf42Q9H799 3197 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 SPDYE3A6NKU9 549 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 STXBP3O00186 592 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 DDAH1O94760 285 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 NDUFV1P49821 464 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 TMEM266Q2M3C6 531 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 ADGRD2Q7Z7M1 963 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 LINC01599Q8WXQ3 324 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 CDHR1Q96JP9 859 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 PCYT2Q99447 389 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 LMAN2LQ9H0V9 348 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 JADE2Q9NQC1 790 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 PRKAG3Q9UGI9 489 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 GINS2Q9Y248 185 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 MYO10Q9HD67 2058 aa13.7□□□□□ -0.22
TRAFD1-205ENST00000548277 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 M0QZ92 97 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 DDX39AO00148 427 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 NCK2O43639 380 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 TBX10O75333 385 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 ITGB1P05556 798 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 GNAQP50148 359 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 ADAM15Q13444 863 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 CAMK1Q14012 370 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 SPOUT1Q5T280 376 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 IER5Q5VY09 327 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 HFE2Q6ZVN8 426 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 KLHL23Q8NBE8 558 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 CYP2W1Q8TAV3 490 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 POF1BQ8WVV4 589 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 CLP1Q92989 425 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 FBXL18Q96ME1 805 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 MAP3K14Q99558 947 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 LZTS2Q9BRK4 669 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 UPF3BQ9BZI7 483 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 AZI2Q9H6S1 392 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 CD207Q9UJ71 328 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 LRFN2Q9ULH4 789 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 PADI3Q9ULW8 664 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 PCDHGC5Q9Y5F6 944 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 TRPV2Q9Y5S1 764 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 COL4A6Q14031 1691 aa13.69□□□□□ -0.22
TRAFD1-205ENST00000548277 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 RRN3P2A6NIE6 340 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 SH2B2O14492 632 aaPredicted RBP13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 MMP1P03956 469 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 ARP10275 920 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms