RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 Q4G0T1 1027 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 EARS2Q5JPH6 523 aaKnown RBP13.39□□□□□ -0.27
RAB5C-204ENST00000547517 LRCH2Q5VUJ6 765 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 MOXD1Q6UVY6 613 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 CCDC60Q8IWA6 550 aaPredicted RBP13.39□□□□□ -0.27
RAB5C-204ENST00000547517 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
RAB5C-204ENST00000547517 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 SAMM50Q9Y512 469 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 LAMA2P24043 3122 aaKnown RBP13.39□□□□□ -0.27
RAB5C-204ENST00000547517 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 CYP3A7-CYP3A51PA0A087WV96 503 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 SLC37A4O43826 429 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 ATG7O95352 703 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 PFKMP08237 780 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 CYP3A7P24462 503 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 RFC2P35250 354 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 THPOP40225 353 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 HMGN5P82970 282 aaKnown RBP13.38□□□□□ -0.27
RAB5C-204ENST00000547517 PLCB4Q15147 1175 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 ZNF618Q5T7W0 954 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 ZNF746Q6NUN9 644 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-204ENST00000547517 ABHD15Q6UXT9 468 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 OTOP2Q7RTS6 562 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 SMAP1Q8IYB5 467 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-204ENST00000547517 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
RAB5C-204ENST00000547517 FAM184AQ8NB25 1140 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 SLC5A5Q92911 643 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 TNFRSF25Q93038 417 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 C8orf76Q96K31 380 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 TEKT3Q9BXF9 490 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 FTOQ9C0B1 505 aaKnown RBP eCLIP13.38□□□□□ -0.27
RAB5C-204ENST00000547517 ZNF302Q9NR11 478 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-204ENST00000547517 SZT2Q5T011 3432 aa13.38□□□□□ -0.27
RAB5C-204ENST00000547517 IGKV6D-21A0A0A0MT36 114 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 ZBBXA8MT70 800 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 BTBD18B2RXH4 712 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
RAB5C-204ENST00000547517 FGBP02675 491 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 PSAPP07602 524 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 CTSHP09668 335 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 GCFC2P16383 781 aaKnown RBP13.37□□□□□ -0.27
RAB5C-204ENST00000547517 SWSAP1Q6NVH7 229 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 PDXDC2PQ6P474 469 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 RUFY4Q6ZNE9 571 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 ETNPPLQ8TBG4 499 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 HERVK_113Q902F9 699 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 VWCEQ96DN2 955 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 TMX3Q96JJ7 454 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 RIT2Q99578 217 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 MTIF3Q9H2K0 278 aaKnown RBP13.37□□□□□ -0.27
RAB5C-204ENST00000547517 UNC45AQ9H3U1 944 aa13.37□□□□□ -0.27
RAB5C-204ENST00000547517 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 INSRRP14616 1297 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 SLC26A2P50443 739 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 ADAM17P78536 824 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAB5C-204ENST00000547517 FAM109BQ6ICB4 259 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-204ENST00000547517 TRAF7Q6Q0C0 670 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
RAB5C-204ENST00000547517 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 TRAPPC12Q8WVT3 735 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 NAP1L4Q99733 375 aaKnown RBP13.36□□□□□ -0.27
RAB5C-204ENST00000547517 CXXC1Q9P0U4 656 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-204ENST00000547517 GABBR1Q9UBS5 961 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 PCDHA10Q9Y5I2 948 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 IGSF9BQ9UPX0 1349 aa13.36□□□□□ -0.27
RAB5C-204ENST00000547517 RSPH10B2B2RC85 870 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 NBNO60934 754 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 PSMD10O75832 226 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 RSPH10BP0C881 870 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 ACTN1P12814 892 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 MCM2P49736 904 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 JAK3P52333 1124 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
RAB5C-204ENST00000547517 MBTPS1Q14703 1052 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 MARCH8Q5T0T0 291 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 RASIP1Q5U651 963 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 PPP4R3AQ6IN85 833 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 TAF2Q6P1X5 1199 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 MIER3Q7Z3K6 550 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 IL27Q8NEV9 243 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 ATP8B4Q8TF62 1192 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 TNPO1Q92973 898 aaKnown RBP13.35□□□□□ -0.27
RAB5C-204ENST00000547517 DISC1Q9NRI5 854 aa13.35□□□□□ -0.27
RAB5C-204ENST00000547517 MBLAC1A4D2B0 266 aaPredicted RBP13.34□□□□□ -0.27
RAB5C-204ENST00000547517 RRN3P2A6NIE6 340 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 GRXCR1A8MXD5 290 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 MARCH6O60337 910 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 HBP1O60381 514 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 CAND2O75155 1236 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms