RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 TMEM260Q9NX78 707 aa8.46□□□□□ -1.06
CPNE8-204ENST00000546603 ZFP69BQ9UJL9 534 aa8.46□□□□□ -1.06
CPNE8-204ENST00000546603 KCNA6P17658 529 aa8.45□□□□□ -1.06
CPNE8-204ENST00000546603 GLRBP48167 497 aa8.45□□□□□ -1.06
CPNE8-204ENST00000546603 SMAD2Q15796 467 aaKnown RBP8.45□□□□□ -1.06
CPNE8-204ENST00000546603 OVCH1Q7RTY7 1134 aa8.45□□□□□ -1.06
CPNE8-204ENST00000546603 LGI4Q8N135 537 aa8.45□□□□□ -1.06
CPNE8-204ENST00000546603 SYNPOQ8N3V7 929 aa8.45□□□□□ -1.06
CPNE8-204ENST00000546603 KANSL2Q9H9L4 492 aa8.45□□□□□ -1.06
CPNE8-204ENST00000546603 ARHGAP28Q9P2N2 729 aa8.45□□□□□ -1.06
CPNE8-204ENST00000546603 PRICKLE3O43900 615 aaPredicted RBP8.44□□□□□ -1.06
CPNE8-204ENST00000546603 CNR2P34972 360 aa8.44□□□□□ -1.06
CPNE8-204ENST00000546603 HERVK_113P62684 666 aa8.44□□□□□ -1.06
CPNE8-204ENST00000546603 PHF19Q5T6S3 580 aa8.44□□□□□ -1.06
CPNE8-204ENST00000546603 DDX53Q86TM3 631 aaKnown RBP8.44□□□□□ -1.06
CPNE8-204ENST00000546603 FERMT3Q86UX7 667 aa8.44□□□□□ -1.06
CPNE8-204ENST00000546603 IGSF22Q8N9C0 903 aa8.44□□□□□ -1.06
CPNE8-204ENST00000546603 CLUHP3Q96NS8 147 aa8.44□□□□□ -1.06
CPNE8-204ENST00000546603 DUSP10Q9Y6W6 482 aa8.44□□□□□ -1.06
CPNE8-204ENST00000546603 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.43□□□□□ -1.06
CPNE8-204ENST00000546603 KCNK3O14649 394 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 C4BPAP04003 597 aaKnown RBP8.43□□□□□ -1.06
CPNE8-204ENST00000546603 ASLP04424 464 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 COL6A1P12109 1028 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 IGFALSP35858 605 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 ABHD17CQ6PCB6 329 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 KLHL36Q8N4N3 616 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 STPG3Q8N7X2 389 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 C2orf69Q8N8R5 385 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 RNPC3Q96LT9 517 aaKnown RBP8.43□□□□□ -1.06
CPNE8-204ENST00000546603 BARX1Q9HBU1 254 aaPredicted RBP8.43□□□□□ -1.06
CPNE8-204ENST00000546603 SLC39A2Q9NP94 309 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 KCND1Q9NSA2 647 aa8.43□□□□□ -1.06
CPNE8-204ENST00000546603 SLC12A8A0AV02 714 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 PRAMEF25A6NGN4 478 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 KRTAP9-7A8MTY7 169 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 B8ZZF3 427 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 PPP1R12AO14974 1030 aaPredicted RBP8.42□□□□□ -1.06
CPNE8-204ENST00000546603 RFPL3O75679 317 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 ASMTLO95671 621 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 KNG1P01042 644 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 TMEM177Q53S58 311 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 DPP8Q6V1X1 898 aaPredicted RBP8.42□□□□□ -1.06
CPNE8-204ENST00000546603 KCNH7Q9NS40 1196 aa8.42□□□□□ -1.06
CPNE8-204ENST00000546603 ESYT3A0FGR9 886 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 SCDO00767 359 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 NFATC3Q12968 1075 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 TCEA2Q15560 299 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 ARHGAP44Q17R89 818 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 ZCCHC8Q6NZY4 707 aaKnown RBP8.41□□□□□ -1.06
CPNE8-204ENST00000546603 PLEKHH3Q7Z736 793 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 HOMER1Q86YM7 354 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 NOSTRINQ8IVI9 506 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 TACO1Q9BSH4 297 aaKnown RBP8.41□□□□□ -1.06
CPNE8-204ENST00000546603 INVSQ9Y283 1065 aa8.41□□□□□ -1.06
CPNE8-204ENST00000546603 H0Y858 1186 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 PRRG2O14669 202 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 OPA1O60313 960 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 HIP1RO75146 1068 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 KLHL18O94889 574 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 IL18BPO95998 194 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 CELA3BP08861 270 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 PTGS1P23219 599 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 AOAHP28039 575 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 SEC23AQ15436 765 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 SURF1Q15526 300 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 CPZQ66K79 652 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 NUDT10Q8NFP7 164 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 MBD6Q96DN6 1003 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 NUDT11Q96G61 164 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 BDH2Q9BUT1 245 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 SAMD15Q9P1V8 674 aa8.4□□□□□ -1.06
CPNE8-204ENST00000546603 DNAJC8O75937 253 aaPredicted RBP8.39□□□□□ -1.07
CPNE8-204ENST00000546603 FLT3P36888 993 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 PLP2Q04941 152 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 PKN3Q6P5Z2 889 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 Q6ZUG5 572 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 DLG3Q92796 817 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 INCENPQ9NQS7 918 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 GALNT8Q9NY28 637 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 ADAM29Q9UKF5 820 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 CNOT11Q9UKZ1 510 aaKnown RBP8.39□□□□□ -1.07
CPNE8-204ENST00000546603 ZDHHC9Q9Y397 364 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 TNPO3Q9Y5L0 923 aaKnown RBP8.39□□□□□ -1.07
CPNE8-204ENST00000546603 B3GALT1Q9Y5Z6 326 aa8.39□□□□□ -1.07
CPNE8-204ENST00000546603 NCANO14594 1321 aa8.38□□□□□ -1.07
CPNE8-204ENST00000546603 B4GALT3O60512 393 aa8.38□□□□□ -1.07
CPNE8-204ENST00000546603 PABPC4Q13310 644 aaKnown RBP eCLIP8.38□□□□□ -1.07
CPNE8-204ENST00000546603 C16orf86Q6ZW13 317 aa8.38□□□□□ -1.07
CPNE8-204ENST00000546603 UBE2R2Q712K3 238 aaPredicted RBP8.38□□□□□ -1.07
CPNE8-204ENST00000546603 OTOP1Q7RTM1 612 aa8.38□□□□□ -1.07
CPNE8-204ENST00000546603 APPBP2Q92624 585 aa8.38□□□□□ -1.07
CPNE8-204ENST00000546603 BOCQ9BWV1 1114 aa8.38□□□□□ -1.07
CPNE8-204ENST00000546603 BTBD7Q9P203 1132 aa8.38□□□□□ -1.07
CPNE8-204ENST00000546603 M0R2C6 588 aa8.37□□□□□ -1.07
CPNE8-204ENST00000546603 FOXP2O15409 715 aa8.37□□□□□ -1.07
CPNE8-204ENST00000546603 PLATP00750 562 aa8.37□□□□□ -1.07
CPNE8-204ENST00000546603 SDHAP31040 664 aa8.37□□□□□ -1.07
CPNE8-204ENST00000546603 IRF9Q00978 393 aa8.37□□□□□ -1.07
CPNE8-204ENST00000546603 CXXC5Q7LFL8 322 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms