RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 FBXO22Q8NEZ5 403 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 GLG1Q92896 1179 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 KCNB2Q92953 911 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 ANO3Q9BYT9 981 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 RC3H2Q9HBD1 1191 aaKnown RBP21.35■■□□□ 1.01
CHERP-204ENST00000546538 BARHL2Q9NY43 387 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 MAFGO15525 162 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 CDC45O75419 566 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 INSRRP14616 1297 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 PPP1R18Q6NYC8 613 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 SYNE3Q6ZMZ3 975 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 IL27Q8NEV9 243 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 TRAPPC12Q8WVT3 735 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 LINC01599Q8WXQ3 324 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 APBB2Q92870 758 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 SMARCAD1Q9H4L7 1026 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 AGO3Q9H9G7 860 aaKnown RBP21.34■■□□□ 1.01
CHERP-204ENST00000546538 AGO4Q9HCK5 861 aaKnown RBP21.34■■□□□ 1.01
CHERP-204ENST00000546538 SLC9A2Q9UBY0 812 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 RAPGEFL1Q9UHV5 662 aa21.34■■□□□ 1.01
CHERP-204ENST00000546538 GOLGA8AA7E2F4 631 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 GOLGA8BA8MQT2 603 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 CCNE2O96020 404 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 ADD1P35611 737 aaKnown RBP21.33■■□□□ 1.01
CHERP-204ENST00000546538 SREBF1P36956 1147 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 ACTR2P61160 394 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 IGBP1P78318 339 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 CEP55Q53EZ4 464 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 FBXO47Q5MNV8 452 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 CRYGNQ8WXF5 182 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 YME1L1Q96TA2 773 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 CDY2AQ9Y6F7 541 aa21.33■■□□□ 1.01
CHERP-204ENST00000546538 TTC3P53804 2025 aa21.33■■□□□ 1
CHERP-204ENST00000546538 C5orf42Q9H799 3197 aa21.33■■□□□ 1
CHERP-204ENST00000546538 NFASCO94856 1347 aa21.33■■□□□ 1
CHERP-204ENST00000546538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.32■■□□□ 1
CHERP-204ENST00000546538 SMCO2A6NFE2 343 aa21.32■■□□□ 1
CHERP-204ENST00000546538 MEIS1O00470 390 aa21.32■■□□□ 1
CHERP-204ENST00000546538 ADCY7P51828 1080 aa21.32■■□□□ 1
CHERP-204ENST00000546538 PLCB4Q15147 1175 aa21.32■■□□□ 1
CHERP-204ENST00000546538 LOXHD1Q8IVV2 1947 aa21.32■■□□□ 1
CHERP-204ENST00000546538 RALGAPA2Q2PPJ7 1873 aa21.31■■□□□ 1
CHERP-204ENST00000546538 FAM86B1E9PN63 330 aa21.31■■□□□ 1
CHERP-204ENST00000546538 ATG7O95352 703 aa21.31■■□□□ 1
CHERP-204ENST00000546538 FAM86B2P0C5J1 330 aa21.31■■□□□ 1
CHERP-204ENST00000546538 APOBRQ0VD83 1088 aa21.31■■□□□ 1
CHERP-204ENST00000546538 TMEM192Q8IY95 271 aa21.31■■□□□ 1
CHERP-204ENST00000546538 KHSRPQ92945 711 aaKnown RBP eCLIP21.31■■□□□ 1
CHERP-204ENST00000546538 UBE2ZQ9H832 354 aaPredicted RBP21.31■■□□□ 1
CHERP-204ENST00000546538 CD320Q9NPF0 282 aa21.31■■□□□ 1
CHERP-204ENST00000546538 IGLV3-22A0A075B6J6 115 aa21.3■■□□□ 1
CHERP-204ENST00000546538 IGKV6D-21A0A0A0MT36 114 aa21.3■■□□□ 1
CHERP-204ENST00000546538 H3BNC9 293 aa21.3■■□□□ 1
CHERP-204ENST00000546538 ENPP3O14638 875 aa21.3■■□□□ 1
CHERP-204ENST00000546538 MRPS6P82932 125 aaKnown RBP21.3■■□□□ 1
CHERP-204ENST00000546538 PKN1Q16512 942 aa21.3■■□□□ 1
CHERP-204ENST00000546538 RTN4RL1Q86UN2 441 aaPredicted RBP21.3■■□□□ 1
CHERP-204ENST00000546538 CRIPAKQ8N1N5 446 aa21.3■■□□□ 1
CHERP-204ENST00000546538 MRPL38Q96DV4 380 aaKnown RBP21.3■■□□□ 1
CHERP-204ENST00000546538 FAM49AQ9H0Q0 323 aaPredicted RBP21.3■■□□□ 1
CHERP-204ENST00000546538 SNX14Q9Y5W7 946 aa21.3■■□□□ 1
CHERP-204ENST00000546538 DHX15O43143 795 aaKnown RBP21.29■■□□□ 1
CHERP-204ENST00000546538 FOSP01100 380 aaPredicted RBP21.29■■□□□ 1
CHERP-204ENST00000546538 RCAN1P53805 252 aa21.29■■□□□ 1
CHERP-204ENST00000546538 TMEM62Q0P6H9 643 aa21.29■■□□□ 1
CHERP-204ENST00000546538 PFKFB3Q16875 520 aaPredicted RBP21.29■■□□□ 1
CHERP-204ENST00000546538 TEX2Q8IWB9 1127 aa21.29■■□□□ 1
CHERP-204ENST00000546538 UIMC1Q96RL1 719 aa21.29■■□□□ 1
CHERP-204ENST00000546538 NID2Q14112 1375 aa21.29■■□□□ 1
CHERP-204ENST00000546538 hCG_1984214I3L0E3 225 aa21.29■■□□□ 1
CHERP-204ENST00000546538 COL9A1P20849 921 aa21.29■■□□□ 1
CHERP-204ENST00000546538 CD52P31358 61 aa21.29■■□□□ 1
CHERP-204ENST00000546538 AP3B2Q13367 1082 aa21.29■■□□□ 1
CHERP-204ENST00000546538 GPM6BQ13491 265 aa21.29■■□□□ 1
CHERP-204ENST00000546538 KRT32Q14532 448 aa21.29■■□□□ 1
CHERP-204ENST00000546538 JAKMIP3Q5VZ66 844 aa21.29■■□□□ 1
CHERP-204ENST00000546538 TSHZ1Q6ZSZ6 1077 aa21.29■■□□□ 1
CHERP-204ENST00000546538 Q6ZUG5 572 aa21.29■■□□□ 1
CHERP-204ENST00000546538 PLPPR4Q7Z2D5 763 aa21.29■■□□□ 1
CHERP-204ENST00000546538 ZNF713Q8N859 430 aaPredicted RBP21.29■■□□□ 1
CHERP-204ENST00000546538 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.29■■□□□ 1
CHERP-204ENST00000546538 SAMD11Q96NU1 681 aa21.29■■□□□ 1
CHERP-204ENST00000546538 SDF4Q9BRK5 362 aa21.29■■□□□ 1
CHERP-204ENST00000546538 RRN3P2A6NIE6 340 aa21.28■■□□□ 1
CHERP-204ENST00000546538 DDX39AO00148 427 aaKnown RBP21.28■■□□□ 1
CHERP-204ENST00000546538 EDIL3O43854 480 aa21.28■■□□□ 1
CHERP-204ENST00000546538 HSPA4P34932 840 aa21.28■■□□□ 1
CHERP-204ENST00000546538 STAT5BP51692 787 aa21.28■■□□□ 1
CHERP-204ENST00000546538 ABHD15Q6UXT9 468 aa21.28■■□□□ 1
CHERP-204ENST00000546538 CCDC60Q8IWA6 550 aaPredicted RBP21.28■■□□□ 1
CHERP-204ENST00000546538 BRF1Q92994 677 aa21.28■■□□□ 1
CHERP-204ENST00000546538 ZNF689Q96CS4 500 aaPredicted RBP21.28■■□□□ 1
CHERP-204ENST00000546538 IL17RAQ96F46 866 aa21.28■■□□□ 1
CHERP-204ENST00000546538 JAKMIP1Q96N16 626 aaKnown RBP21.28■■□□□ 1
CHERP-204ENST00000546538 EPHX3Q9H6B9 360 aa21.28■■□□□ 1
CHERP-204ENST00000546538 TRPC6Q9Y210 931 aa21.28■■□□□ 1
CHERP-204ENST00000546538 PCDHA2Q9Y5H9 948 aa21.28■■□□□ 1
CHERP-204ENST00000546538 ZBTB42B2RXF5 422 aa21.27■■□□□ 1
CHERP-204ENST00000546538 PPFIA3O75145 1194 aa21.27■■□□□ 1
CHERP-204ENST00000546538 SCG2P13521 617 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms