RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 ZNF302Q9NR11 478 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 MYH9P35579 1960 aaKnown RBP23.4■■□□□ 1.34
SCARB1-211ENST00000546215 MARK3P27448 753 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 DDIT3P35638 169 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 TLE2Q04725 743 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 SF3A1Q15459 793 aaKnown RBP23.4■■□□□ 1.34
SCARB1-211ENST00000546215 FAM160B1Q5W0V3 765 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 TOX2Q96NM4 488 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 FTOQ9C0B1 505 aaKnown RBP eCLIP23.4■■□□□ 1.34
SCARB1-211ENST00000546215 HDAC6Q9UBN7 1215 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 GABBR1Q9UBS5 961 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 ATP11BQ9Y2G3 1177 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 PQBP1O60828 265 aaKnown RBP23.39■■□□□ 1.33
SCARB1-211ENST00000546215 ATP4AP20648 1035 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 PRPHP41219 470 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 TECP42680 631 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 SLC26A2P50443 739 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 PTPN11Q06124 597 aaPredicted RBP23.39■■□□□ 1.33
SCARB1-211ENST00000546215 NCAPH2Q6IBW4 605 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 PDXDC2PQ6P474 469 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 FAM126BQ8IXS8 530 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 C7orf31Q8N865 590 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 GTF2IRD1Q9UHL9 959 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 CLIC4Q9Y696 253 aa23.39■■□□□ 1.33
SCARB1-211ENST00000546215 MROH7Q68CQ1 1323 aa23.38■■□□□ 1.33
SCARB1-211ENST00000546215 IGSF9BQ9UPX0 1349 aa23.38■■□□□ 1.33
SCARB1-211ENST00000546215 EPHA7Q15375 998 aa23.38■■□□□ 1.33
SCARB1-211ENST00000546215 IL17AQ16552 155 aa23.38■■□□□ 1.33
SCARB1-211ENST00000546215 UGCGQ16739 394 aa23.38■■□□□ 1.33
SCARB1-211ENST00000546215 FAM47CQ5HY64 1035 aa23.38■■□□□ 1.33
SCARB1-211ENST00000546215 POTEMA6NI47 508 aa23.37■■□□□ 1.33
SCARB1-211ENST00000546215 CD4P01730 458 aa23.37■■□□□ 1.33
SCARB1-211ENST00000546215 SMIM10L2AP0DMW4 78 aa23.37■■□□□ 1.33
SCARB1-211ENST00000546215 SMIM10L2BP0DMW5 78 aa23.37■■□□□ 1.33
SCARB1-211ENST00000546215 HOXC8P31273 242 aa23.37■■□□□ 1.33
SCARB1-211ENST00000546215 FXR2P51116 673 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCARB1-211ENST00000546215 PLCB4Q15147 1175 aa23.37■■□□□ 1.33
SCARB1-211ENST00000546215 DPF3Q92784 378 aa23.37■■□□□ 1.33
SCARB1-211ENST00000546215 USP28Q96RU2 1077 aa23.37■■□□□ 1.33
SCARB1-211ENST00000546215 ZNF862O60290 1169 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 B4GALT4O60513 344 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 BMP15O95972 392 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 FAAP100Q0VG06 881 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 HIC1Q14526 733 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 PTPAQ15257 358 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 ARL6IP4Q66PJ3 421 aaKnown RBP23.36■■□□□ 1.33
SCARB1-211ENST00000546215 GDF6Q6KF10 455 aaPredicted RBP23.36■■□□□ 1.33
SCARB1-211ENST00000546215 TRPV6Q9H1D0 765 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 TRMT13Q9NUP7 481 aaKnown RBP23.36■■□□□ 1.33
SCARB1-211ENST00000546215 DAXXQ9UER7 740 aaPredicted RBP23.36■■□□□ 1.33
SCARB1-211ENST00000546215 CEP131Q9UPN4 1083 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 MYH15Q9Y2K3 1946 aa23.36■■□□□ 1.33
SCARB1-211ENST00000546215 TRIP12Q14669 1992 aaPredicted RBP23.36■■□□□ 1.33
SCARB1-211ENST00000546215 DCDC2CA8MYV0 355 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 EVI5O60447 810 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 MLLT1Q03111 559 aaPredicted RBP23.35■■□□□ 1.33
SCARB1-211ENST00000546215 PDIA5Q14554 519 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 TMEM266Q2M3C6 531 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 DTHD1Q6ZMT9 781 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 IGSF22Q8N9C0 903 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 BANK1Q8NDB2 785 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 ATP8B4Q8TF62 1192 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 EIF2AK1Q9BQI3 630 aaKnown RBP23.35■■□□□ 1.33
SCARB1-211ENST00000546215 KAT6AQ92794 2004 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 POTEB3A0JP26 581 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 P4HBP07237 508 aaKnown RBP23.35■■□□□ 1.33
SCARB1-211ENST00000546215 CEBPZQ03701 1054 aaKnown RBP23.35■■□□□ 1.33
SCARB1-211ENST00000546215 POTEBQ6S5H4 581 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 ATP6V0A1Q93050 837 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 HSD17B14Q9BPX1 270 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 SETD4Q9NVD3 440 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 RGL1Q9NZL6 768 aa23.35■■□□□ 1.33
SCARB1-211ENST00000546215 SLITRK3O94933 977 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 QARSP47897 775 aaKnown RBP23.34■■□□□ 1.33
SCARB1-211ENST00000546215 PSMC5P62195 406 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 ADAM17P78536 824 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 ZNF200P98182 395 aaPredicted RBP23.34■■□□□ 1.33
SCARB1-211ENST00000546215 FOXD4L6Q3SYB3 417 aaPredicted RBP23.34■■□□□ 1.33
SCARB1-211ENST00000546215 FOXD4L3Q6VB84 417 aaPredicted RBP23.34■■□□□ 1.33
SCARB1-211ENST00000546215 CKAP2LQ8IYA6 745 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 C7orf61Q8IZ16 206 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 DYDC2Q96IM9 177 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 ZNF396Q96N95 335 aaPredicted RBP23.34■■□□□ 1.33
SCARB1-211ENST00000546215 CTAGE1Q96RT6 745 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 WRAP73Q9P2S5 460 aaPredicted RBP23.34■■□□□ 1.33
SCARB1-211ENST00000546215 TRPC6Q9Y210 931 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 NRCAMQ92823 1304 aa23.34■■□□□ 1.33
SCARB1-211ENST00000546215 C17orf102A2RUQ5 167 aa23.33■■□□□ 1.33
SCARB1-211ENST00000546215 TLR3O15455 904 aaKnown RBP23.33■■□□□ 1.33
SCARB1-211ENST00000546215 HBP1O60381 514 aa23.33■■□□□ 1.33
SCARB1-211ENST00000546215 INSRRP14616 1297 aa23.33■■□□□ 1.33
SCARB1-211ENST00000546215 NASPP49321 788 aaPredicted RBP23.33■■□□□ 1.33
SCARB1-211ENST00000546215 PRKCEQ02156 737 aa23.33■■□□□ 1.33
SCARB1-211ENST00000546215 PPFIA1Q13136 1202 aa23.33■■□□□ 1.33
SCARB1-211ENST00000546215 BBXQ8WY36 941 aaPredicted RBP23.33■■□□□ 1.33
SCARB1-211ENST00000546215 TFIP11Q9UBB9 837 aaKnown RBP23.33■■□□□ 1.33
SCARB1-211ENST00000546215 PDE4DIPQ5VU43 2346 aa23.33■■□□□ 1.33
SCARB1-211ENST00000546215 STBD1O95210 358 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 CLTBP09497 229 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 CYP4A11Q02928 519 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms