RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 UBE2Q2Q8WVN8 375 aa21.54■■□□□ 1.04
BPTF-208ENST00000544778 GSDMAQ96QA5 445 aa21.54■■□□□ 1.04
BPTF-208ENST00000544778 USP28Q96RU2 1077 aa21.54■■□□□ 1.04
BPTF-208ENST00000544778 POLR3AO14802 1390 aaPredicted RBP21.54■■□□□ 1.04
BPTF-208ENST00000544778 NNMTP40261 264 aa21.54■■□□□ 1.04
BPTF-208ENST00000544778 SYTL2Q9HCH5 934 aa21.54■■□□□ 1.04
BPTF-208ENST00000544778 KITP10721 976 aa21.54■■□□□ 1.04
BPTF-208ENST00000544778 USPL1Q5W0Q7 1092 aa21.54■■□□□ 1.04
BPTF-208ENST00000544778 MCF2P10911 925 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 GTSE1Q9NYZ3 720 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 A0A0D9SFI3 127 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 FGAP02671 866 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 FAM180AQ6UWF9 173 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 CCHCR1Q8TD31 782 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 SLC26A7Q8TE54 656 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 MSTO1Q9BUK6 570 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 BBS9Q3SYG4 887 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 TESK2Q96S53 571 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 TRIM45Q9H8W5 580 aaPredicted RBP21.53■■□□□ 1.04
BPTF-208ENST00000544778 ANGPTL2Q9UKU9 493 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 FTCDO95954 541 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 SYDE2Q5VT97 1194 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 PPHLN1Q8NEY8 458 aaKnown RBP21.53■■□□□ 1.04
BPTF-208ENST00000544778 PBXIP1Q96AQ6 731 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
BPTF-208ENST00000544778 MED4Q9NPJ6 270 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 SLC35F6Q8N357 371 aa21.53■■□□□ 1.04
BPTF-208ENST00000544778 CHCHD3Q9NX63 227 aaKnown RBP21.53■■□□□ 1.04
BPTF-208ENST00000544778 ESRRAP11474 423 aaPredicted RBP21.52■■□□□ 1.04
BPTF-208ENST00000544778 PAPOLAP51003 745 aaKnown RBP21.52■■□□□ 1.04
BPTF-208ENST00000544778 RBL2Q08999 1139 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 PTPN21Q16825 1174 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 TRPV6Q9H1D0 765 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 ADCY9O60503 1353 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 GRAMD1BQ3KR37 738 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 IQANK1A0A1B0GTG1 560 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 LRRC24Q50LG9 513 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 GPATCH4Q5T3I0 446 aaKnown RBP21.52■■□□□ 1.04
BPTF-208ENST00000544778 URGCPQ8TCY9 931 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 KIFC3Q9BVG8 833 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 CFAP69A5D8W1 941 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 ERVV-2B6SEH9 535 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 ZNF513Q8N8E2 541 aaPredicted RBP21.52■■□□□ 1.04
BPTF-208ENST00000544778 CDHR1Q96JP9 859 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 SRPK1Q96SB4 655 aaKnown RBP21.52■■□□□ 1.04
BPTF-208ENST00000544778 WDR11Q9BZH6 1224 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 ATG3Q9NT62 314 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 ABCD1P33897 745 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 PTH1RQ03431 593 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 PPP6R3Q5H9R7 873 aaPredicted RBP21.52■■□□□ 1.04
BPTF-208ENST00000544778 COA7Q96BR5 231 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 KLHL8Q9P2G9 620 aaPredicted RBP21.52■■□□□ 1.04
BPTF-208ENST00000544778 SLC4A7Q9Y6M7 1214 aa21.52■■□□□ 1.04
BPTF-208ENST00000544778 POLE2P56282 527 aa21.52■■□□□ 1.03
BPTF-208ENST00000544778 TRIML2Q8N7C3 387 aa21.52■■□□□ 1.03
BPTF-208ENST00000544778 B4GALNT2Q8NHY0 566 aa21.52■■□□□ 1.03
BPTF-208ENST00000544778 NAF1Q96HR8 494 aaKnown RBP21.52■■□□□ 1.03
BPTF-208ENST00000544778 TRPC5Q9UL62 973 aaPredicted RBP21.52■■□□□ 1.03
BPTF-208ENST00000544778 XDHP47989 1333 aa21.52■■□□□ 1.03
BPTF-208ENST00000544778 CRLF3Q8IUI8 442 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 ULK4Q96C45 1275 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 THOC1Q96FV9 657 aaKnown RBP21.51■■□□□ 1.03
BPTF-208ENST00000544778 SMYD3Q9H7B4 428 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 SCOCQ9UIL1 159 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 AP1ARQ63HQ0 302 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 CMA1P23946 247 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 TBCKQ8TEA7 893 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 BCL2L12Q9HB09 334 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 TXLNGQ9NUQ3 528 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 BMP3P12645 472 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 BZW1Q7L1Q6 419 aaKnown RBP21.51■■□□□ 1.03
BPTF-208ENST00000544778 BTN2A2Q8WVV5 523 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 ERICH1Q86X53 443 aa21.51■■□□□ 1.03
BPTF-208ENST00000544778 QTRT2Q9H974 415 aaKnown RBP21.51■■□□□ 1.03
BPTF-208ENST00000544778 FARP1Q9Y4F1 1045 aaPredicted RBP21.51■■□□□ 1.03
BPTF-208ENST00000544778 ING2Q9H160 280 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 LAD1O00515 517 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 DNAJC6O75061 913 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 RBM6P78332 1123 aaKnown RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 HDLBPQ00341 1268 aaKnown RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 RPAINQ86UA6 219 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 AP1M1Q9BXS5 423 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 NGRNQ9NPE2 291 aaKnown RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 STX18Q9P2W9 335 aaKnown RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 HOXB7P09629 217 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 CCDC90BQ9GZT6 254 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 MID2Q9UJV3 735 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 PCDHA7Q9UN72 937 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 PGRMC1O00264 195 aaKnown RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 CTNND1O60716 968 aaKnown RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 GSPT1P15170 499 aaKnown RBP21.5■■□□□ 1.03
BPTF-208ENST00000544778 VPS39Q96JC1 886 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 PARVGQ9HBI0 331 aa21.5■■□□□ 1.03
BPTF-208ENST00000544778 ARHGEF10O15013 1369 aa21.49■■□□□ 1.03
BPTF-208ENST00000544778 BRD1O95696 1058 aa21.49■■□□□ 1.03
BPTF-208ENST00000544778 HOXA13P31271 388 aaPredicted RBP21.49■■□□□ 1.03
BPTF-208ENST00000544778 TUBB6Q9BUF5 446 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms