RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	MYOCD	Q8IZQ8	938 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ADSSL1	Q8N142	457 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	EHBP1	Q8NDI1	1231 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ARHGAP45	Q92619	1136 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	KAT2B	Q92831	832 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	COPS5	Q92905	334 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	WNT8B	Q93098	351 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	MSLNL	Q96KJ4	702 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CUEDC1	Q9NWM3	386 aa	Predicted RBP	5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CLIP2	Q9UDT6	1046 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CD207	Q9UJ71	328 aa		5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	NOP58	Q9Y2X3	529 aa	Known RBP	5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.75	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ZBED9	Q6R2W3	1325 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	LCT	P09848	1927 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ATG2A	Q2TAZ0	1938 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	TMEM232	C9JQI7	657 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	C5orf67	F2Z3F1	127 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	SCAMP3	O14828	347 aa	Known RBP	5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	NKRF	O15226	690 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	BCAR3	O75815	825 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	MBD4	O95243	580 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	AMH	P03971	560 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	BMP3	P12645	472 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ALAS1	P13196	640 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ICAM3	P32942	547 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ALDH5A1	P51649	535 aa	Predicted RBP	5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CAMK1	Q14012	370 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	TTF1	Q15361	905 aa	Predicted RBP	5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	BRDT	Q58F21	947 aa	Predicted RBP	5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ZNF618	Q5T7W0	954 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	GIMAP6	Q6P9H5	292 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	FRMD5	Q7Z6J6	570 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	TRMT2A	Q8IZ69	625 aa	Known RBP	5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	LRRC47	Q8N1G4	583 aa	Known RBP	5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	SMRP1	Q8NCR6	262 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	GMCL1P1	Q8NEA9	526 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	DBF4B	Q8NFT6	615 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	STK32A	Q8WU08	396 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	NKD2	Q969F2	451 aa	Predicted RBP	5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	TOP1MT	Q969P6	601 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	RMDN1	Q96DB5	314 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ZFP42	Q96MM3	310 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CNTNAP3B	Q96NU0	1288 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	YME1L1	Q96TA2	773 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CNTNAP3	Q9BZ76	1288 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CLEC1B	Q9P126	229 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	GTF2IRD1	Q9UHL9	959 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	SYNPO2	Q9UMS6	1093 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	USP24	Q9UPU5	2620 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	OTOGL	Q3ZCN5	2332 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	RAD50	Q92878	1312 aa		5.74	□□□□□ -1.49
NPIPB4-219	ENST00000543660	FASN	P49327	2511 aa	Known RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	hCG_2014768	A0A024R1R8	64 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	LOC102724159	A0A0B4J2E5	919 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	GOLIM4	O00461	696 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ARIH2	O95376	493 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CHGB	P05060	677 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	RB1	P06400	928 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CD46	P15529	392 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ADD2	P35612	726 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	BMPR1A	P36894	532 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	STAT2	P52630	851 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	RRP1	P56182	461 aa	Known RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CHMP4BP1	P59074	171 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	SNAP25	P60880	206 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	COASY	Q13057	564 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	PTK7	Q13308	1070 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	GNL2	Q13823	731 aa	Known RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	BAAT	Q14032	418 aa	Predicted RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	PPP2R5B	Q15173	497 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	PWP2	Q15269	919 aa	Known RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	QPCT	Q16769	361 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	SLFN13	Q68D06	897 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	NSMF	Q6X4W1	530 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	DGLUCY	Q7Z3D6	616 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	AMOTL1	Q8IY63	956 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	TMEM105	Q8N8V8	129 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	STAG1	Q8WVM7	1258 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	CEP95	Q96GE4	821 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	RIPOR3	Q96MK2	946 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	PHF7	Q9BWX1	381 aa	Predicted RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	LMAN2L	Q9H0V9	348 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	IGFLR1	Q9H665	355 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	MTMR4	Q9NYA4	1195 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	HDAC6	Q9UBN7	1215 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ZMIZ1	Q9ULJ6	1067 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	TNN	Q9UQP3	1299 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	USP15	Q9Y4E8	981 aa	Predicted RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	ANKRD11	Q6UB99	2663 aa	Predicted RBP	5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	GPR179	Q6PRD1	2367 aa		5.73	□□□□□ -1.49
NPIPB4-219	ENST00000543660	LZTS3	O60299	673 aa	Predicted RBP	5.72	□□□□□ -1.49
NPIPB4-219	ENST00000543660	PLA2G6	O60733	806 aa		5.72	□□□□□ -1.49
NPIPB4-219	ENST00000543660	UPP2	O95045	317 aa		5.72	□□□□□ -1.49
NPIPB4-219	ENST00000543660	GLP2R	O95838	553 aa		5.72	□□□□□ -1.49
NPIPB4-219	ENST00000543660	TTLL1	O95922	423 aa		5.72	□□□□□ -1.49
NPIPB4-219	ENST00000543660	MMP1	P03956	469 aa		5.72	□□□□□ -1.49
NPIPB4-219	ENST00000543660	MMP3	P08254	477 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms