RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 TRPC6Q9Y210 931 aa8.15□□□□□ -1.1
NUP43-206ENST00000543637 NLRC5Q86WI3 1866 aa8.15□□□□□ -1.11
NUP43-206ENST00000543637 SIP14410 1827 aa8.15□□□□□ -1.11
NUP43-206ENST00000543637 WDR81Q562E7 1941 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 ESYT2A0FGR8 921 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 POTEB3A0JP26 581 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 DDX39AO00148 427 aaKnown RBP8.14□□□□□ -1.11
NUP43-206ENST00000543637 RFXAPO00287 272 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 MEIS1O00470 390 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 BACH1O14867 736 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 CYP3A4P08684 503 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 ARP10275 920 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 INSRRP14616 1297 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 POU3F3P20264 500 aaPredicted RBP8.14□□□□□ -1.11
NUP43-206ENST00000543637 HOXC8P31273 242 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 SREBF1P36956 1147 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
NUP43-206ENST00000543637 SLC26A2P50443 739 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 NLRP5P59047 1200 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 ACTR2P61160 394 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 DEFB103AP81534 67 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 FUT2Q10981 343 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 ADGRE1Q14246 886 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 HIC1Q14526 733 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 GPNMBQ14956 572 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 FAM26DQ5JW98 314 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 ERICH6BQ5W0A0 696 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 POTEBQ6S5H4 581 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.14□□□□□ -1.113e-6■■■□□ 15.6
NUP43-206ENST00000543637 RPAINQ86UA6 219 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 TRIM50Q86XT4 487 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 REXO1Q8N1G1 1221 aaKnown RBP8.14□□□□□ -1.11
NUP43-206ENST00000543637 NME8Q8N427 588 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 USP38Q8NB14 1042 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 LMBR1Q8WVP7 490 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 DNAJB3Q8WWF6 145 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 WNT8BQ93098 351 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 ZNF274Q96GC6 653 aaPredicted RBP8.14□□□□□ -1.11
NUP43-206ENST00000543637 SAMD11Q96NU1 681 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 ZNF577Q9BSK1 485 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 IFIH1Q9BYX4 1025 aaKnown RBP8.14□□□□□ -1.11
NUP43-206ENST00000543637 ZMYND12Q9H0C1 365 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 AGO4Q9HCK5 861 aaKnown RBP8.14□□□□□ -1.11
NUP43-206ENST00000543637 SH3GLB2Q9NR46 395 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 FAM217BQ9NTX9 383 aaPredicted RBP8.14□□□□□ -1.11
NUP43-206ENST00000543637 SAMM50Q9Y512 469 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 MYO9BQ13459 2157 aa8.14□□□□□ -1.11
NUP43-206ENST00000543637 IPO5O00410 1097 aaKnown RBP8.13□□□□□ -1.11
NUP43-206ENST00000543637 HBP1O60381 514 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 ATG7O95352 703 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 PSAPP07602 524 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 IFNAR1P17181 557 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 XBP1P17861 261 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 PDIA3P30101 505 aaKnown RBP8.13□□□□□ -1.11
NUP43-206ENST00000543637 USP11P51784 963 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 ADAM17P78536 824 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 SETQ01105 290 aaPredicted RBP8.13□□□□□ -1.11
NUP43-206ENST00000543637 SWSAP1Q6NVH7 229 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 TMCO2Q7Z6W1 182 aaPredicted RBP8.13□□□□□ -1.11
NUP43-206ENST00000543637 FBXO22Q8NEZ5 403 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 CYP2W1Q8TAV3 490 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 PHKBQ93100 1093 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 TOP1MTQ969P6 601 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 ASB2Q96Q27 587 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 YME1L1Q96TA2 773 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 AGXT2Q9BYV1 514 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 TM6SF1Q9BZW5 370 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 ZSWIM6Q9HCJ5 1215 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 ZNF302Q9NR11 478 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 NRBP2Q9NSY0 501 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 MTUS1Q9ULD2 1270 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 COG5Q9UP83 839 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 MTCH2Q9Y6C9 303 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 SQORQ9Y6N5 450 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 RALGAPA2Q2PPJ7 1873 aa8.13□□□□□ -1.11
NUP43-206ENST00000543637 TCF20Q9UGU0 1960 aaKnown RBP8.12□□□□□ -1.11
NUP43-206ENST00000543637 SMIM35A0A1B0GVV1 85 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 CDKL5O76039 1030 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 DEXIO95424 95 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 CHRNA1P02708 482 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 STAG3L1P0CL83 205 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 GHRP10912 638 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 KLRC1P26715 233 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 ERVK-21P61565 698 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 MRPS6P82932 125 aaKnown RBP8.12□□□□□ -1.11
NUP43-206ENST00000543637 STK3Q13188 491 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 GRB10Q13322 594 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 PLCB4Q15147 1175 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 PKN1Q16512 942 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 PTPROQ16827 1216 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 ZNF484Q5JVG2 852 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 TYW1BQ6NUM6 668 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 PDXDC2PQ6P474 469 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 MTHFD1LQ6UB35 978 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 ABHD15Q6UXT9 468 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 FAM43BQ6ZT52 329 aaPredicted RBP8.12□□□□□ -1.11
NUP43-206ENST00000543637 TRMT1LQ7Z2T5 733 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms