RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 NRCAMQ92823 1304 aa14.34□□□□□ -0.11
CACNA2D4-216ENST00000543405 PLXNA4Q9HCM2 1894 aa14.33□□□□□ -0.11
CACNA2D4-216ENST00000543405 STAM2O75886 525 aa14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 ITGB1P05556 798 aa14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 SDSP20132 328 aa14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 TAF2Q6P1X5 1199 aa14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 FCHSD1Q86WN1 690 aa14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 RIOX1Q9H6W3 641 aa14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 BARX2Q9UMQ3 279 aaPredicted RBP14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 USP15Q9Y4E8 981 aaPredicted RBP14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 MRPL42Q9Y6G3 142 aaKnown RBP14.33□□□□□ -0.12
CACNA2D4-216ENST00000543405 MBLAC1A4D2B0 266 aaPredicted RBP14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 FIBPO43427 364 aa14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 NAALADL2Q58DX5 795 aa14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 FBXO47Q5MNV8 452 aa14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 IFIT1BQ5T764 474 aaKnown RBP14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 CMTR2Q8IYT2 770 aaKnown RBP14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 SPPL3Q8TCT6 385 aa14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 ATOH1Q92858 354 aaPredicted RBP14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 SENP7Q9BQF6 1050 aa14.32□□□□□ -0.12
CACNA2D4-216ENST00000543405 CYTH3O43739 400 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 AVPR2P30518 371 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 GRM4Q14833 912 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 UTP14CQ5TAP6 766 aaKnown RBP14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 TSHZ1Q6ZSZ6 1077 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 ASCL5Q7RTU5 278 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 HOMER1Q86YM7 354 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 PPP2R3CQ969Q6 453 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 PIGSQ96S52 555 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 UBAC1Q9BSL1 405 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 DSCC1Q9BVC3 393 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 PHF7Q9BWX1 381 aaPredicted RBP14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 KRT23Q9C075 422 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 AGO3Q9H9G7 860 aaKnown RBP14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 PCDHGC5Q9Y5F6 944 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 VPS13AQ96RL7 3174 aa14.31□□□□□ -0.12
CACNA2D4-216ENST00000543405 PROB1E7EW31 1015 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 H0Y858 1186 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 PDGFBP01127 241 aaPredicted RBP14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 NRIP1P48552 1158 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 TRAF1Q13077 416 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 HDAC1Q13547 482 aaPredicted RBP14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 MARCH8Q5T0T0 291 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 RTN4RL1Q86UN2 441 aaPredicted RBP14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 IFNLR1Q8IU57 520 aaPredicted RBP14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 NPAS4Q8IUM7 802 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 KLHL23Q8NBE8 558 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 SUSD6Q92537 303 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 RILPL2Q969X0 211 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 RPGRIP1Q96KN7 1286 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 CNNM2Q9H8M5 875 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 TLR9Q9NR96 1032 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 TUBE1Q9UJT0 475 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 CDY2AQ9Y6F7 541 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 LOXHD1Q8IVV2 1947 aa14.3□□□□□ -0.12
CACNA2D4-216ENST00000543405 TCF7P36402 384 aaPredicted RBP14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 RBM10P98175 930 aaKnown RBP14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 PPFIA1Q13136 1202 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 GRIK4Q16099 956 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 PTPN21Q16825 1174 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 IMMTQ16891 758 aaKnown RBP14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 PCNX4Q63HM2 1172 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 RBM23Q86U06 439 aaKnown RBP14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 POF1BQ8WVV4 589 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 DNAJB3Q8WWF6 145 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 IRF2BPLQ9H1B7 796 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 RTEL1Q9NZ71 1219 aa14.29□□□□□ -0.12
CACNA2D4-216ENST00000543405 PNMA6FA0A0J9YX94 578 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 PRR23AA6NEV1 266 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 KCNA2P16389 499 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 ATF7P17544 494 aaPredicted RBP14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 CD52P31358 61 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 MRPS6P82932 125 aaKnown RBP14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 SP4Q02446 784 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 FNDC1Q4ZHG4 1894 aaPredicted RBP14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 XRRA1Q6P2D8 792 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 CWC27Q6UX04 472 aaKnown RBP14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 RSPH3Q86UC2 560 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 VN1R2Q8NFZ6 395 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 ATP8B4Q8TF62 1192 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 SQORQ9Y6N5 450 aa14.28□□□□□ -0.12
CACNA2D4-216ENST00000543405 GSTTP1A0A1W2PQM5 241 aa14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 GALR2O43603 387 aaPredicted RBP14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 ATP9AO75110 1047 aa14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 TROAPQ12815 778 aa14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 PAN2Q504Q3 1202 aaKnown RBP14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 FTHL17Q9BXU8 183 aa14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 LNPKQ9C0E8 428 aa14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 OSBPL3Q9H4L5 887 aa14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 ERAP1Q9NZ08 941 aa14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
CACNA2D4-216ENST00000543405 IGSF9BQ9UPX0 1349 aa14.26□□□□□ -0.13
CACNA2D4-216ENST00000543405 PIK3CDO00329 1044 aa14.26□□□□□ -0.13
CACNA2D4-216ENST00000543405 RPLP2P05387 115 aaKnown RBP14.26□□□□□ -0.13
CACNA2D4-216ENST00000543405 SCG2P13521 617 aa14.26□□□□□ -0.13
CACNA2D4-216ENST00000543405 GATMP50440 423 aa14.26□□□□□ -0.13
CACNA2D4-216ENST00000543405 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms