RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 IGBP1P78318 339 aa23.03■■□□□ 1.28
DDB1-220ENST00000542337 TJAP1Q5JTD0 557 aa23.03■■□□□ 1.28
DDB1-220ENST00000542337 TRIM22Q8IYM9 498 aa23.03■■□□□ 1.28
DDB1-220ENST00000542337 ATXN2LQ8WWM7 1075 aaKnown RBP23.03■■□□□ 1.28
DDB1-220ENST00000542337 THEGQ9P2T0 379 aa23.03■■□□□ 1.28
DDB1-220ENST00000542337 TCEAL9Q9UHQ7 104 aa23.03■■□□□ 1.28
DDB1-220ENST00000542337 MYO9BQ13459 2157 aa23.03■■□□□ 1.28
DDB1-220ENST00000542337 CYP3A4P08684 503 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 INSRRP14616 1297 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 IFNAR1P17181 557 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 POU3F3P20264 500 aaPredicted RBP23.02■■□□□ 1.28
DDB1-220ENST00000542337 SLC26A2P50443 739 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 EVCP57679 992 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 CCT2P78371 535 aaKnown RBP23.02■■□□□ 1.28
DDB1-220ENST00000542337 PKN1Q16512 942 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 FAM160B1Q5W0V3 765 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 TGS1Q96RS0 853 aaKnown RBP23.02■■□□□ 1.28
DDB1-220ENST00000542337 IFIH1Q9BYX4 1025 aaKnown RBP23.02■■□□□ 1.28
DDB1-220ENST00000542337 TM6SF1Q9BZW5 370 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 PPP4R2Q9NY27 417 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 GBF1Q92538 1859 aa23.02■■□□□ 1.28
DDB1-220ENST00000542337 LCHNA4D1U4 455 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 MBLAC1A4D2B0 266 aaPredicted RBP23.01■■□□□ 1.27
DDB1-220ENST00000542337 CPLX1O14810 134 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 BACH1O14867 736 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 SETQ01105 290 aaPredicted RBP23.01■■□□□ 1.27
DDB1-220ENST00000542337 ITGB3BPQ13352 177 aaPredicted RBP23.01■■□□□ 1.27
DDB1-220ENST00000542337 SKIV2LQ15477 1246 aaKnown RBP23.01■■□□□ 1.27
DDB1-220ENST00000542337 IER5Q5VY09 327 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 CPLX2Q6PUV4 134 aaKnown RBP23.01■■□□□ 1.27
DDB1-220ENST00000542337 RUFY4Q6ZNE9 571 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 IL27Q8NEV9 243 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 PCYT2Q99447 389 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 MTCH2Q9Y6C9 303 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 PRUNE2Q8WUY3 3088 aa23.01■■□□□ 1.27
DDB1-220ENST00000542337 M0QZ92 97 aa23■■□□□ 1.27
DDB1-220ENST00000542337 DDX39AO00148 427 aaKnown RBP23■■□□□ 1.27
DDB1-220ENST00000542337 ARHGEF15O94989 841 aa23■■□□□ 1.27
DDB1-220ENST00000542337 CHRNA1P02708 482 aa23■■□□□ 1.27
DDB1-220ENST00000542337 MRPS5P82675 430 aaKnown RBP23■■□□□ 1.27
DDB1-220ENST00000542337 SSRP1Q08945 709 aaKnown RBP23■■□□□ 1.27
DDB1-220ENST00000542337 NTRK3Q16288 839 aa23■■□□□ 1.27
DDB1-220ENST00000542337 ERICH6BQ5W0A0 696 aa23■■□□□ 1.27
DDB1-220ENST00000542337 MIS18BP1Q6P0N0 1132 aa23■■□□□ 1.27
DDB1-220ENST00000542337 DNAJB3Q8WWF6 145 aa23■■□□□ 1.27
DDB1-220ENST00000542337 ZNF577Q9BSK1 485 aa23■■□□□ 1.27
DDB1-220ENST00000542337 PRDM6Q9NQX0 595 aa23■■□□□ 1.27
DDB1-220ENST00000542337 TBC1D22BQ9NU19 505 aa23■■□□□ 1.27
DDB1-220ENST00000542337 DOCK5Q9H7D0 1870 aa23■■□□□ 1.27
DDB1-220ENST00000542337 POTEB3A0JP26 581 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 FAM86B1E9PN63 330 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 IPO5O00410 1097 aaKnown RBP22.99■■□□□ 1.27
DDB1-220ENST00000542337 ATG7O95352 703 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 FAM86B2P0C5J1 330 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 NLRP5P59047 1200 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 PLCB4Q15147 1175 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 MARCH8Q5T0T0 291 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 POTEBQ6S5H4 581 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 ZNF274Q96GC6 653 aaPredicted RBP22.99■■□□□ 1.27
DDB1-220ENST00000542337 YME1L1Q96TA2 773 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 NCOA5Q9HCD5 579 aaKnown RBP22.99■■□□□ 1.27
DDB1-220ENST00000542337 SH3GLB2Q9NR46 395 aa22.99■■□□□ 1.27
DDB1-220ENST00000542337 LINC01553A4QN01 128 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 EPOPA6NHQ4 379 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 PPFIA3O75145 1194 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 UPP2O95045 317 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 GHRP10912 638 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 ERVK-21P61565 698 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 MRPS6P82932 125 aaKnown RBP22.98■■□□□ 1.27
DDB1-220ENST00000542337 GRB10Q13322 594 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 TOP1MTQ969P6 601 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 FAM49AQ9H0Q0 323 aaPredicted RBP22.98■■□□□ 1.27
DDB1-220ENST00000542337 PDRG1Q9NUG6 133 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 CHD7Q9P2D1 2997 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 MTUS1Q9ULD2 1270 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 PCDHA2Q9Y5H9 948 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 CDY2AQ9Y6F7 541 aa22.98■■□□□ 1.27
DDB1-220ENST00000542337 HBP1O60381 514 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 MKRN4PQ13434 485 aaPredicted RBP22.97■■□□□ 1.27
DDB1-220ENST00000542337 TOB2Q14106 344 aaPredicted RBP22.97■■□□□ 1.27
DDB1-220ENST00000542337 AAK1Q2M2I8 961 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 PDXDC2PQ6P474 469 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 ABHD15Q6UXT9 468 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 CRYGNQ8WXF5 182 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 ASB2Q96Q27 587 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 ZNF302Q9NR11 478 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 LMCD1Q9NZU5 365 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 VPS54Q9P1Q0 977 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 CUL9Q8IWT3 2517 aa22.97■■□□□ 1.27
DDB1-220ENST00000542337 IGLV3-22A0A075B6J6 115 aa22.96■■□□□ 1.27
DDB1-220ENST00000542337 CCNE2O96020 404 aa22.96■■□□□ 1.27
DDB1-220ENST00000542337 HTRA4P83105 476 aaPredicted RBP22.96■■□□□ 1.27
DDB1-220ENST00000542337 MGAT3Q09327 533 aa22.96■■□□□ 1.27
DDB1-220ENST00000542337 PRR16Q569H4 304 aa22.96■■□□□ 1.27
DDB1-220ENST00000542337 NME8Q8N427 588 aa22.96■■□□□ 1.27
DDB1-220ENST00000542337 C22orf23Q9BZE7 217 aa22.96■■□□□ 1.27
DDB1-220ENST00000542337 OSBPL7Q9BZF2 842 aa22.96■■□□□ 1.27
DDB1-220ENST00000542337 UPF3BQ9BZI7 483 aaKnown RBP22.96■■□□□ 1.27
DDB1-220ENST00000542337 IGKV6D-21A0A0A0MT36 114 aa22.95■■□□□ 1.26
DDB1-220ENST00000542337 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms