RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 PLA2G4DQ86XP0 818 aa16.85■□□□□ 0.29
DDX11-217ENST00000540935 TRIM22Q8IYM9 498 aa16.85■□□□□ 0.29
DDX11-217ENST00000540935 PPM1EQ8WY54 764 aa16.85■□□□□ 0.29
DDX11-217ENST00000540935 SYMPKQ92797 1274 aaKnown RBP16.85■□□□□ 0.29
DDX11-217ENST00000540935 ZNF274Q96GC6 653 aaPredicted RBP16.85■□□□□ 0.29
DDX11-217ENST00000540935 PCYT2Q99447 389 aa16.85■□□□□ 0.29
DDX11-217ENST00000540935 COL25A1Q9BXS0 654 aaPredicted RBP16.85■□□□□ 0.29
DDX11-217ENST00000540935 SLC26A6Q9BXS9 759 aa16.85■□□□□ 0.29
DDX11-217ENST00000540935 TSPYL2Q9H2G4 693 aaPredicted RBP16.85■□□□□ 0.29
DDX11-217ENST00000540935 SH3GLB2Q9NR46 395 aa16.85■□□□□ 0.29
DDX11-217ENST00000540935 INSL6Q9Y581 213 aa16.85■□□□□ 0.29
DDX11-217ENST00000540935 MICAL3Q7RTP6 2002 aa16.84■□□□□ 0.29
DDX11-217ENST00000540935 FAM86B1E9PN63 330 aa16.84■□□□□ 0.29
DDX11-217ENST00000540935 FAM86B2P0C5J1 330 aa16.84■□□□□ 0.29
DDX11-217ENST00000540935 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
DDX11-217ENST00000540935 ATXN2LQ8WWM7 1075 aaKnown RBP16.84■□□□□ 0.29
DDX11-217ENST00000540935 ARNTL2Q8WYA1 636 aa16.84■□□□□ 0.29
DDX11-217ENST00000540935 IFIH1Q9BYX4 1025 aaKnown RBP16.84■□□□□ 0.29
DDX11-217ENST00000540935 CERS4Q9HA82 394 aa16.84■□□□□ 0.29
DDX11-217ENST00000540935 TBC1D22BQ9NU19 505 aa16.84■□□□□ 0.29
DDX11-217ENST00000540935 TRPC6Q9Y210 931 aa16.84■□□□□ 0.29
DDX11-217ENST00000540935 EYSQ5T1H1 3165 aa16.84■□□□□ 0.29
DDX11-217ENST00000540935 IGLV3-22A0A075B6J6 115 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 IPO5O00410 1097 aaKnown RBP16.83■□□□□ 0.28
DDX11-217ENST00000540935 CPLX1O14810 134 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 INSRRP14616 1297 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 CCT2P78371 535 aaKnown RBP16.83■□□□□ 0.28
DDX11-217ENST00000540935 CCDC85BQ15834 202 aaPredicted RBP16.83■□□□□ 0.28
DDX11-217ENST00000540935 MARCH8Q5T0T0 291 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 FAM160B1Q5W0V3 765 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 CPLX2Q6PUV4 134 aaKnown RBP16.83■□□□□ 0.28
DDX11-217ENST00000540935 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.83■□□□□ 0.28
DDX11-217ENST00000540935 RUFY4Q6ZNE9 571 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 TMCO2Q7Z6W1 182 aaPredicted RBP16.83■□□□□ 0.28
DDX11-217ENST00000540935 MYOCDQ8IZQ8 938 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 FAM177A1Q8N128 213 aaPredicted RBP16.83■□□□□ 0.28
DDX11-217ENST00000540935 UNC80Q8N2C7 3258 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 THEGQ9P2T0 379 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 TCEAL9Q9UHQ7 104 aa16.83■□□□□ 0.28
DDX11-217ENST00000540935 CHD9Q3L8U1 2897 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 IGKV6D-21A0A0A0MT36 114 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 LCHNA4D1U4 455 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 ARHGEF15O94989 841 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 CHRNA1P02708 482 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 CIITAP33076 1130 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 IGBP1P78318 339 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 HTRA4P83105 476 aaPredicted RBP16.82■□□□□ 0.28
DDX11-217ENST00000540935 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
DDX11-217ENST00000540935 PLCB4Q15147 1175 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 TJAP1Q5JTD0 557 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 IER5Q5VY09 327 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 MIS18BP1Q6P0N0 1132 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 TOP1MTQ969P6 601 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 TGS1Q96RS0 853 aaKnown RBP16.82■□□□□ 0.28
DDX11-217ENST00000540935 ZNF577Q9BSK1 485 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 C22orf23Q9BZE7 217 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 NCOA5Q9HCD5 579 aaKnown RBP16.82■□□□□ 0.28
DDX11-217ENST00000540935 MTCH2Q9Y6C9 303 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 SQORQ9Y6N5 450 aa16.82■□□□□ 0.28
DDX11-217ENST00000540935 POTEB3A0JP26 581 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 LINC01553A4QN01 128 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 M0QZ92 97 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 BACH1O14867 736 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 DHX15O43143 795 aaKnown RBP16.81■□□□□ 0.28
DDX11-217ENST00000540935 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
DDX11-217ENST00000540935 DEXIO95424 95 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 CCNE2O96020 404 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 NLRP5P59047 1200 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 ERVK-21P61565 698 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 MGAT3Q09327 533 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 ZNF746Q6NUN9 644 aaPredicted RBP16.81■□□□□ 0.28
DDX11-217ENST00000540935 FAM117BQ6P1L5 589 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 POTEBQ6S5H4 581 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 ABHD15Q6UXT9 468 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 SMAP1Q8IYB5 467 aaPredicted RBP16.81■□□□□ 0.28
DDX11-217ENST00000540935 DNAJB3Q8WWF6 145 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
DDX11-217ENST00000540935 PDRG1Q9NUG6 133 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 LMCD1Q9NZU5 365 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 VPS54Q9P1Q0 977 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 PCDHA2Q9Y5H9 948 aa16.81■□□□□ 0.28
DDX11-217ENST00000540935 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 DDX39AO00148 427 aaKnown RBP16.8■□□□□ 0.28
DDX11-217ENST00000540935 RFXAPO00287 272 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 HBP1O60381 514 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 GHRP10912 638 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 USP11P51784 963 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 MRPS6P82932 125 aaKnown RBP16.8■□□□□ 0.28
DDX11-217ENST00000540935 KRT76Q01546 638 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 FAM43BQ6ZT52 329 aaPredicted RBP16.8■□□□□ 0.28
DDX11-217ENST00000540935 MICALL1Q8N3F8 863 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 NME8Q8N427 588 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 SP7Q8TDD2 431 aaPredicted RBP16.8■□□□□ 0.28
DDX11-217ENST00000540935 ATP8B4Q8TF62 1192 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 SAMD11Q96NU1 681 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 ZNF302Q9NR11 478 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 CDY2AQ9Y6F7 541 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 A0A0C4DFX4 3053 aa16.8■□□□□ 0.28
DDX11-217ENST00000540935 COL1A2P08123 1366 aa16.79■□□□□ 0.28
DDX11-217ENST00000540935 SMIM35A0A1B0GVV1 85 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms