RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, human

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM65-203	ENST00000540812	RSPH3	Q86UC2	560 aa		18.59	■□□□□ 0.57
TRIM65-203	ENST00000540812	BANK1	Q8NDB2	785 aa		18.59	■□□□□ 0.57
TRIM65-203	ENST00000540812	MXRA8	Q9BRK3	442 aa		18.59	■□□□□ 0.57
TRIM65-203	ENST00000540812	LRFN3	Q9BTN0	628 aa		18.59	■□□□□ 0.57
TRIM65-203	ENST00000540812	FAM49A	Q9H0Q0	323 aa	Predicted RBP	18.59	■□□□□ 0.57
TRIM65-203	ENST00000540812	AGO3	Q9H9G7	860 aa	Known RBP	18.59	■□□□□ 0.57
TRIM65-203	ENST00000540812	RC3H2	Q9HBD1	1191 aa	Known RBP	18.59	■□□□□ 0.57
TRIM65-203	ENST00000540812	KCNH7	Q9NS40	1196 aa		18.59	■□□□□ 0.57
TRIM65-203	ENST00000540812		H3BQ06	376 aa	Predicted RBP	18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	MAFG	O15525	162 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	AR	P10275	920 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	CTNNB1	P35222	781 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	MRPS6	P82932	125 aa	Known RBP	18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	FUT2	Q10981	343 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	APOA5	Q6Q788	366 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	FAM178B	Q8IXR5	827 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	FIBCD1	Q8N539	461 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	NEK9	Q8TD19	979 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	LINC01599	Q8WXQ3	324 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	NEK1	Q96PY6	1258 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	RIC8A	Q9NPQ8	531 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	C11orf16	Q9NQ32	467 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	SLC9A2	Q9UBY0	812 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	BRPF3	Q9ULD4	1205 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	NLRC5	Q86WI3	1866 aa		18.58	■□□□□ 0.56
TRIM65-203	ENST00000540812	GRXCR2	A6NFK2	248 aa		18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	NAPA	P54920	295 aa		18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	EXOSC10	Q01780	885 aa	Known RBP	18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	ITGB3BP	Q13352	177 aa	Predicted RBP	18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	RTN1	Q16799	776 aa		18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	SYNE3	Q6ZMZ3	975 aa		18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	TSHZ1	Q6ZSZ6	1077 aa		18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	RASEF	Q8IZ41	740 aa		18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	TRAPPC12	Q8WVT3	735 aa		18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	NSUN3	Q9H649	340 aa	Known RBP	18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	RBM28	Q9NW13	759 aa	Known RBP	18.57	■□□□□ 0.56
TRIM65-203	ENST00000540812	NFASC	O94856	1347 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	ADGRA3	Q8IWK6	1321 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	TTC3	P53804	2025 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	FAM86C2P	A6NEL3	165 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	STXBP3	O00186	592 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	GRM6	O15303	877 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	CD52	P31358	61 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	BMPR1A	P36894	532 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	ACTR2	P61160	394 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	TMEM62	Q0P6H9	643 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	PLCB4	Q15147	1175 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	TMEM31	Q5JXX7	168 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	SDF4	Q9BRK5	362 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	ANO3	Q9BYT9	981 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	AGO4	Q9HCK5	861 aa	Known RBP	18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	TMEM260	Q9NX78	707 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	TRPC6	Q9Y210	931 aa		18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812		V9GY48	417 aa	Predicted RBP	18.56	■□□□□ 0.56
TRIM65-203	ENST00000540812	RALGAPA2	Q2PPJ7	1873 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	RRN3P2	A6NIE6	340 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	C5orf67	F2Z3F1	127 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	PI4K2B	G5E9Z4	385 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	ZBTB43	O43298	467 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	ADCY7	P51828	1080 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	COL19A1	Q14993	1142 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	ADCK5	Q3MIX3	580 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	CEP55	Q53EZ4	464 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	BMP2KL	Q5H9B9	411 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	RNF20	Q5VTR2	975 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	PPP1R18	Q6NYC8	613 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	EP400NL	Q6ZTU2	488 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	DHX32	Q7L7V1	743 aa	Known RBP	18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	RTN4RL1	Q86UN2	441 aa	Predicted RBP	18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	GJD3	Q8N144	294 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	CLP1	Q92989	425 aa	Known RBP	18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	ZNF689	Q96CS4	500 aa	Predicted RBP	18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	PABPC5	Q96DU9	382 aa	Known RBP	18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	AZI2	Q9H6S1	392 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	PCDHA2	Q9Y5H9	948 aa		18.55	■□□□□ 0.56
TRIM65-203	ENST00000540812	C5orf42	Q9H799	3197 aa		18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	SMCO2	A6NFE2	343 aa		18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	RB1	P06400	928 aa		18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	CENPB	P07199	599 aa	Predicted RBP	18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	PLA2G5	P39877	138 aa		18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	STAT5B	P51692	787 aa		18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	BTG3	Q14201	252 aa	Predicted RBP	18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	IER5	Q5VY09	327 aa		18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	PLPPR4	Q7Z2D5	763 aa		18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	C11orf84	Q9BUA3	381 aa	Predicted RBP	18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	TRPV2	Q9Y5S1	764 aa		18.54	■□□□□ 0.56
TRIM65-203	ENST00000540812	ATG2A	Q2TAZ0	1938 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	GOLGA8A	A7E2F4	631 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	GOLGA8B	A8MQT2	603 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	MEIS1	O00470	390 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	GPR37L1	O60883	481 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	DGKI	O75912	1065 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	CSPG5	O95196	566 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	CCNE2	O96020	404 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	FOS	P01100	380 aa	Predicted RBP	18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	CDC27	P30260	824 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	SSTR3	P32745	418 aa	Predicted RBP	18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	SREBF1	P36956	1147 aa		18.53	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms