RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ZNF839A8K0R7 811 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 ARVCFO00192 962 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 RASGRP1O95267 797 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 AMY2AP04746 511 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 AMY2BP19961 511 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 EPHA5P54756 1037 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 SURF1Q15526 300 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 LONRF2Q1L5Z9 754 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 LRP10Q7Z4F1 713 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 KLHL36Q8N4N3 616 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 PTPN18Q99952 460 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 ST6GALNAC2Q9UJ37 374 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 COQ6Q9Y2Z9 468 aa5.55□□□□□ -1.52
MDM2-227ENST00000540709 H0Y858 1186 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 MAN2B1O00754 1011 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 SCDO00767 359 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 IL18BPO95998 194 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 MAGEA10P43363 369 aaPredicted RBP5.54□□□□□ -1.52
MDM2-227ENST00000540709 PPP2CBP62714 309 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 PPP2CAP67775 309 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 NFKB2Q00653 900 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 DBPQ10586 325 aaPredicted RBP5.54□□□□□ -1.52
MDM2-227ENST00000540709 EFEMP1Q12805 493 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 BMS1Q14692 1282 aaKnown RBP5.54□□□□□ -1.52
MDM2-227ENST00000540709 CPZQ66K79 652 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 DBX2Q6ZNG2 339 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 RALYLQ86SE5 291 aaKnown RBP5.54□□□□□ -1.52
MDM2-227ENST00000540709 GGNQ86UU5 652 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 ZSWIM2Q8NEG5 633 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 WDR48Q8TAF3 677 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 SLC7A14Q8TBB6 771 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 KISS1RQ969F8 398 aaPredicted RBP5.54□□□□□ -1.52
MDM2-227ENST00000540709 MBD6Q96DN6 1003 aa5.54□□□□□ -1.52
MDM2-227ENST00000540709 RBM15Q96T37 977 aaKnown RBP eCLIP5.54□□□□□ -1.528e-6■■■■■ 30.1
MDM2-227ENST00000540709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.53□□□□□ -1.52
MDM2-227ENST00000540709 EFCAB14O75071 495 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 KLHL18O94889 574 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 KNG1P01042 644 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 COL6A1P12109 1028 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 PUM1Q14671 1186 aaKnown RBP eCLIP5.53□□□□□ -1.52
MDM2-227ENST00000540709 WDR72Q3MJ13 1102 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 ZC3H12BQ5HYM0 836 aaKnown RBP5.53□□□□□ -1.52
MDM2-227ENST00000540709 Q6ZUG5 572 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 OSBPL2Q9H1P3 480 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 KCND1Q9NSA2 647 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 PPP4R1LQ9P1A2 415 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 SFMBT1Q9UHJ3 866 aa5.53□□□□□ -1.52
MDM2-227ENST00000540709 ZNF561-AS1K7EIQ3 104 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 WNT9AO14904 365 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 ADCY8P40145 1251 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 RRADP55042 308 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 ZXDCQ2QGD7 858 aaPredicted RBP5.52□□□□□ -1.53
MDM2-227ENST00000540709 FIGNQ5HY92 759 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 DPP8Q6V1X1 898 aaPredicted RBP5.52□□□□□ -1.53
MDM2-227ENST00000540709 BRAPQ7Z569 592 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 LILRB2Q8N423 598 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 THAP3Q8WTV1 239 aaPredicted RBP5.52□□□□□ -1.53
MDM2-227ENST00000540709 MKL1Q969V6 931 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 LRRC37BQ96QE4 947 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 DEF6Q9H4E7 631 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 UCKL1Q9NWZ5 548 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 ADAM29Q9UKF5 820 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 CNOT11Q9UKZ1 510 aaKnown RBP5.52□□□□□ -1.53
MDM2-227ENST00000540709 PTPN22Q9Y2R2 807 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 PTCH2Q9Y6C5 1203 aa5.52□□□□□ -1.53
MDM2-227ENST00000540709 KRT37O76014 449 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 PTGS1P23219 599 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 MC4RP32245 332 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 GJA4P35212 333 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 TMEM132BQ14DG7 1078 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 ZNF568Q3ZCX4 644 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 CIR1Q86X95 450 aaPredicted RBP5.51□□□□□ -1.53
MDM2-227ENST00000540709 IFNL2Q8IZJ0 200 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 IGSF22Q8N9C0 903 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 SREK1Q8WXA9 508 aaKnown RBP5.51□□□□□ -1.53
MDM2-227ENST00000540709 ERCC4Q92889 916 aaPredicted RBP5.51□□□□□ -1.53
MDM2-227ENST00000540709 SCLYQ96I15 445 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 SAMD11Q96NU1 681 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 SMURF1Q9HCE7 757 aa5.51□□□□□ -1.53
MDM2-227ENST00000540709 CDK11AQ9UQ88 783 aaPredicted RBP5.51□□□□□ -1.53
MDM2-227ENST00000540709 RAPGEF3O95398 923 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 C4BPAP04003 597 aaKnown RBP5.5□□□□□ -1.53
MDM2-227ENST00000540709 CHGBP05060 677 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 MMEP08473 750 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 ZNF888P0CJ79 500 aaPredicted RBP5.5□□□□□ -1.53
MDM2-227ENST00000540709 CSF2RBP32927 897 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 ADAM17P78536 824 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 NOLC1Q14978 699 aaKnown RBP eCLIP5.5□□□□□ -1.53
MDM2-227ENST00000540709 SEC23AQ15436 765 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 PKN3Q6P5Z2 889 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 FGD2Q7Z6J4 655 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 C2orf69Q8N8R5 385 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 HIPK4Q8NE63 616 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 BORCS6Q96GS4 357 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 MRFAP1L1Q96HT8 127 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 GNRHR2Q96P88 292 aa5.5□□□□□ -1.53
MDM2-227ENST00000540709 PDGFDQ9GZP0 370 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms