RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 MYOCDQ8IZQ8 938 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 U2AF1L4Q8WU68 220 aaKnown RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 CHURC1Q8WUH1 139 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 WDR24Q96S15 920 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 CUEDC2Q9H467 287 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 MYO1AQ9UBC5 1043 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 ASIC3Q9UHC3 531 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 SLC37A4O43826 429 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 PPP1R11O60927 126 aaPredicted RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 ORC2Q13416 577 aaPredicted RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 TNFAIP1Q13829 316 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 NBPF9Q3BBW0 867 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 PRR16Q569H4 304 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 CCDC105Q8IYK2 499 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 ACER1Q8TDN7 264 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 KRT12Q99456 494 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 MRPL44Q9H9J2 332 aaKnown RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 DDX39AO00148 427 aaKnown RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 KRIT1O00522 736 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 KRT5P13647 590 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 GCFC2P16383 781 aaKnown RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 HOXA13P31271 388 aaPredicted RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 VPS41P49754 854 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 KRT31Q15323 416 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 EXOC4Q96A65 974 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 TACO1Q9BSH4 297 aaKnown RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 MTFR1LQ9H019 292 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 EPB41L5Q9HCM4 733 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 NKIRAS1Q9NYS0 192 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 DNM3Q9UQ16 869 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 C10orf71Q711Q0 1435 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 EXOC3O60645 756 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 NEBLO76041 1014 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 CD44P16070 742 aaKnown RBP10.92□□□□□ -0.66
TRAF1-202ENST00000540010 UAP1Q16222 522 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-202ENST00000540010 MYCT1Q8N699 235 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 MAGEF1Q9HAY2 307 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 MYOZ2Q9NPC6 264 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 ATP2A1O14983 1001 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 HARSP12081 509 aaKnown RBP10.92□□□□□ -0.66
TRAF1-202ENST00000540010 ZSCAN20P17040 1043 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-202ENST00000540010 HAUS3Q68CZ6 603 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 SMCR8Q8TEV9 937 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-202ENST00000540010 DLEC1Q9Y238 1755 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 MYO1CO00159 1063 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 CACNB1Q02641 598 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-202ENST00000540010 RASA3Q14644 834 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 TBC1D10BQ4KMP7 808 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-202ENST00000540010 USP37Q86T82 979 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 GMCL1P1Q8NEA9 526 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 GJA10Q969M2 543 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
TRAF1-202ENST00000540010 NRXN2Q9P2S2 1712 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 A6NNZ2 444 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 KCNA3P22001 575 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 CCZ1BP86790 482 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 CCZ1P86791 482 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 IFT88Q13099 833 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 SETDB1Q15047 1291 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 TUBB8Q3ZCM7 444 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 ANKRD42Q8N9B4 389 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 RSRC1Q96IZ7 334 aaKnown RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 CCDC169A6NNP5 214 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 MYL1P05976 194 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 ASNSP08243 561 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 XRCC5P13010 732 aaKnown RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 MAP2K2P36507 400 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 PRCPP42785 496 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 CLNS1AP54105 237 aaKnown RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 CYP4A11Q02928 519 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 BIRC3Q13489 604 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 C6orf163Q5TEZ5 329 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 GPBP1Q86WP2 473 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 SPATA20Q8TB22 786 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 LARP4BQ92615 738 aaKnown RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 NAP1L3Q99457 506 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 VPS33BQ9H267 617 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 ARMCX3Q9UH62 379 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 PRR12Q9ULL5 1215 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 TRIM49BA6NDI0 452 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 WNT10BO00744 389 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 MFAP3LO75121 409 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 TAL1P17542 331 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 INTS8Q75QN2 995 aaKnown RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 VSIG1Q86XK7 387 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 GSPT2Q8IYD1 628 aaKnown RBP10.91□□□□□ -0.66
TRAF1-202ENST00000540010 RWDD2AQ9UIY3 292 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 LTBP1Q14766 1721 aa10.91□□□□□ -0.66
TRAF1-202ENST00000540010 PPP1R3GB7ZBB8 358 aa10.9□□□□□ -0.66
TRAF1-202ENST00000540010 HEXIM1O94992 359 aaKnown RBP10.9□□□□□ -0.66
TRAF1-202ENST00000540010 MOCS3O95396 460 aa10.9□□□□□ -0.66
TRAF1-202ENST00000540010 FTCDO95954 541 aa10.9□□□□□ -0.66
TRAF1-202ENST00000540010 FOSP01100 380 aaPredicted RBP10.9□□□□□ -0.66
TRAF1-202ENST00000540010 STAT1P42224 750 aa10.9□□□□□ -0.66
TRAF1-202ENST00000540010 MAP3K9P80192 1104 aa10.9□□□□□ -0.66
TRAF1-202ENST00000540010 ADAM9Q13443 819 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms